rename to kgcl_schema (#4)

INCATools · Jul 5, 2022 · fdcadde · fdcadde
1 parent 058b0ce
commit fdcadde
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Showing 45 changed files with 195 additions and 196 deletions.
diff --git a/.github/workflows/deploy_docs.yml b/.github/workflows/deploy_docs.yml
@@ -8,7 +8,7 @@ on:
 
     # paths:
     # - 'src/docs/*'
-    # - 'src/kgcl/schema/kgcl.yaml'
+    # - 'src/kgcl_schema/schema/kgcl_schema.yaml'
 
 
 # A workflow run is made up of one or more jobs that can run sequentially or in parallel

diff --git a/about.yaml b/about.yaml
@@ -1,3 +1,3 @@
-name: kgcl
+name: kgcl_schema
 description: Knowledge Graph Change Language.
-source_schema_path: src/kgcl/schema/kgcl.yaml
+source_schema_path: src/kgcl_schema/schema/kgcl_schema.yaml
diff --git a/mkdocs.yml b/mkdocs.yml
@@ -27,5 +27,5 @@ nav:
 #  - Home: home.md
   - Index: index.md
   - About: about.md
-site_url: https://incatools.github.io/kgcl/
-repo_url: https://github.com/INCATools/kgcl
+site_url: https://incatools.github.io/kgcl_schema/
+repo_url: https://github.com/INCATools/kgcl_schema
diff --git a/project/prefixmap/kgcl.yaml b/project/prefixmap/kgcl.yaml
@@ -1,11 +1,11 @@
 {
    "IAO": "http://purl.obolibrary.org/obo/IAO_",
-   "basics": "https://w3id.org/kgcl/basics/",
+   "basics": "https://w3id.org/kgcl_schema/basics/",
    "dcterms": "http://purl.org/dc/terms/",
-   "kgcl": "http://w3id.org/kgcl/",
+   "kgcl": "http://w3id.org/kgcl_schema/",
    "linkml": "https://w3id.org/linkml/",
    "oio": "http://www.geneontology.org/formats/oboInOwl#",
-   "om": "http://w3id.org/kgcl/om/",
+   "om": "http://w3id.org/kgcl_schema/om/",
    "owl": "http://www.w3.org/2002/07/owl#",
    "prov": "http://www.w3.org/ns/prov#",
    "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",

diff --git a/pyproject.toml b/pyproject.toml
@@ -1,7 +1,7 @@
 [tool.poetry]
-name = "kgcl"
-version = "0.1.0"
-description = "Schema fro the KGCL project."
+name = "kgcl_schema"
+version = "0.0.0"
+description = "Schema for the KGCL project."
 authors = [
     "Chris Mungall <[email protected]>",
     "Harshad Hegde <[email protected]>"
@@ -25,9 +25,9 @@ requires = ["poetry-core>=1.0.0"]
 build-backend = "poetry.core.masonry.api"
 
 [tool.poetry.scripts]
-kgcl-diff = "kgcl.kgcl_diff:cli"
-kgcl-apply = "kgcl.kgcl:cli"
-kgcl-parse = "kgcl.grammar.parser:cli"
+kgcl-diff = "kgcl_schema.kgcl_diff:cli"
+kgcl-apply = "kgcl_schema.kgcl:cli"
+kgcl-parse = "kgcl_schema.grammar.parser:cli"
 
 [tool.poetry.extras]
 docs = ["linkml", "mkdocs-material"]
diff --git a/src/kgcl/README.md → src/kgcl_schema/README.md b/src/kgcl/README.md → src/kgcl_schema/README.md
diff --git a/src/kgcl/__init__.py → src/kgcl_schema/__init__.py b/src/kgcl/__init__.py → src/kgcl_schema/__init__.py
diff --git a/src/kgcl/apply/__init__.py → src/kgcl_schema/apply/__init__.py b/src/kgcl/apply/__init__.py → src/kgcl_schema/apply/__init__.py
diff --git a/src/kgcl/apply/graph_transformer.py → src/kgcl_schema/apply/graph_transformer.py b/src/kgcl/apply/graph_transformer.py → src/kgcl_schema/apply/graph_transformer.py
@@ -3,7 +3,7 @@
 from typing import List
 
 import rdflib
-from kgcl.datamodel.kgcl import Change
+from kgcl_schema.datamodel.kgcl import Change
 
 from .kgcl_2_sparql import convert
 

diff --git a/src/kgcl/apply/kgcl_2_sparql.py → src/kgcl_schema/apply/kgcl_2_sparql.py b/src/kgcl/apply/kgcl_2_sparql.py → src/kgcl_schema/apply/kgcl_2_sparql.py
@@ -3,12 +3,12 @@
 import re
 from typing import Optional, List
 
-from kgcl.datamodel.kgcl import (ClassCreation, EdgeCreation, EdgeDeletion,
-                                 NewSynonym, NodeAnnotationChange, NodeCreation,
-                                 NodeDeepening, NodeDeletion, NodeMove,
-                                 NodeObsoletion, NodeRename, NodeShallowing,
-                                 NodeUnobsoletion, PlaceUnder, PredicateChange,
-                                 RemovedNodeFromSubset, RemoveUnder, Change)
+from kgcl_schema.datamodel.kgcl import (ClassCreation, EdgeCreation, EdgeDeletion,
+                                        NewSynonym, NodeAnnotationChange, NodeCreation,
+                                        NodeDeepening, NodeDeletion, NodeMove,
+                                        NodeObsoletion, NodeRename, NodeShallowing,
+                                        NodeUnobsoletion, PlaceUnder, PredicateChange,
+                                        RemovedNodeFromSubset, RemoveUnder, Change)
 
 
 CURIE_PATTERN = re.compile(r"^(\w+):(\S+)$")