Increment lale version to 0.8.4 #2854
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--- | |
name: Tests | |
on: [push, pull_request] | |
jobs: | |
static: | |
name: static checks / linters | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: [3.8, 3.9, '3.10', '3.11'] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager .[full,test,dev] | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: pre-commit checks | |
run: pre-commit run -a | |
docs: | |
name: Documentation build | |
runs-on: ubuntu-latest | |
needs: [static] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.8 | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install doc dependencies | |
run: pip install -r docs/requirements.txt | |
- name: Install lale | |
run: pip install --no-dependencies -e . | |
- name: pip list packages | |
run: pip list | |
- name: Install latex (used for math notation in sphinx) | |
run: > | |
sudo apt-get update -y && | |
sudo apt-get install -y | |
latexmk texlive-latex-recommended texlive-latex-extra texlive-fonts-recommended | |
dvipng librsvg2-bin | |
- name: Run sphinx | |
run: sphinx-build "." "_build" -W --keep-going | |
working-directory: ./docs | |
# test_matrix_pr and test_matrix_master have a lot of redundancy | |
# If GitHub actions adds support for conditional matrix expressions | |
# these should be combined, but current workarounds seem overly complex | |
test_matrix_pr: | |
name: Test (PR) | |
runs-on: ubuntu-latest | |
if: ${{github.event_name == 'pull_request' }} | |
needs: [static] | |
strategy: | |
fail-fast: false | |
matrix: | |
test-case: | |
- test/test_core_classifiers.py | |
- test/test_core_regressors.py | |
- test/test_core_transformers.py | |
- test/test_core_pipeline.py | |
- test/test_custom_schemas.py | |
- test/test_json_pretty_viz.py | |
- test/test_grammar.py | |
- test/test_type_checking.py | |
- test/test_interoperability.py | |
- test/test_optimizers.py | |
- test/test_pipeline.py | |
- test/test_autogen_lib.py | |
- test/test_snapml.py | |
- test/test_relational.py | |
- test/test_category_encoders.py | |
python-version: [3.9] | |
setup-target: ['.[full,test]'] | |
include: | |
- test-case: test/test_core_misc.py | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
- test-case: test/test_core_misc.py | |
python-version: 3.9 | |
setup-target: '.[full,test]' | |
- test-case: test/test_core_misc.py | |
python-version: '3.10' | |
setup-target: '.[full,test]' | |
- test-case: test/test_core_misc.py | |
python-version: '3.11' | |
setup-target: '.[full,test]' | |
- test-case: test/test_autogen_lib.py | |
python-version: '3.11' | |
setup-target: '.[test]' | |
- test-case: test/test_halving_gridsearchcv.py | |
python-version: 3.8 | |
setup-target: '.[test]' | |
- test-case: test/test_aif360.py | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
- test-case: test/test_relational_sklearn.py | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install system packages | |
run: sudo apt-get install graphviz swig | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: Install deps for test_relational_sklearn | |
if: ${{ matrix.test-case == 'test/test_relational_sklearn.py' }} | |
run: pip install 'scikit-learn>=1.0' | |
- name: Install deps for test_snapml | |
if: ${{ matrix.test-case == 'test/test_snapml.py' }} | |
run: pip install 'numpy>=1.20.1,<1.24' | |
- name: Imbalanced learn version for Python 3.8 | |
if: ${{ matrix.test-case == 'test/test_interoperability.py' && matrix.python-version == 3.8}} | |
run: pip install 'imbalanced-learn==0.9.0' 'scikit-learn==1.0.2' | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: py.test -v --capture=tee-sys ${{matrix.test-case}} | |
test_matrix_master: | |
name: Test (master) | |
runs-on: ubuntu-latest | |
if: ${{ github.event_name == 'push' }} | |
needs: [static] | |
strategy: | |
fail-fast: false | |
matrix: | |
test-case: | |
- test/test_core_classifiers.py | |
- test/test_core_regressors.py | |
- test/test_core_misc.py | |
- test/test_core_pipeline.py | |
- test/test_custom_schemas.py | |
- test/test_json_pretty_viz.py | |
- test/test_grammar.py | |
- test/test_type_checking.py | |
- test/test_interoperability.py | |
- test/test_optimizers.py | |
- test/test_pipeline.py | |
- test/test_relational.py | |
- test/test_category_encoders.py | |
python-version: [3.8, 3.9, '3.10', '3.11'] | |
setup-target: ['.[full,test]'] | |
include: | |
- test-case: test/test_core_transformers.py | |
python-version: 3.9 | |
setup-target: '.[full,test]' | |
- test-case: test/test_core_transformers.py | |
python-version: '3.10' | |
setup-target: '.[full,test]' | |
- test-case: test/test_core_transformers.py | |
python-version: '3.11' | |
setup-target: '.[full,test]' | |
- test-case: test/test_autogen_lib.py | |
python-version: '3.11' | |
setup-target: '.[test]' | |
- test-case: test/test_halving_gridsearchcv.py | |
python-version: 3.8 | |
setup-target: '.[test]' | |
- test-case: test/test_aif360.py | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
- test-case: test/test_relational_sklearn.py | |
python-version: 3.8 | |
setup-target: '.[test]' | |
- test-case: test/test_snapml.py | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
- test-case: test/test_snapml.py | |
python-version: 3.9 | |
setup-target: '.[full,test]' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install system packages | |
run: sudo apt-get install graphviz swig | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: Install deps for test_relational_sklearn | |
if: ${{ matrix.test-case == 'test/test_relational_sklearn.py' }} | |
run: pip install 'scikit-learn>=1.0' | |
- name: Install deps for test_snapml | |
if: ${{ matrix.test-case == 'test/test_snapml.py' }} | |
run: pip install 'numpy>=1.20.1,<1.24' | |
- name: Imbalanced learn version for Python 3.8 | |
if: ${{ matrix.test-case == 'test/test_interoperability.py' && matrix.python-version == 3.8}} | |
run: pip install 'imbalanced-learn==0.9.0' 'scikit-learn==1.0.2' | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: py.test -v --capture=tee-sys ${{matrix.test-case}} | |
test_newer: | |
name: Test with newest sklearn | |
runs-on: ubuntu-latest | |
needs: [static] | |
strategy: | |
fail-fast: false | |
matrix: | |
test-case: | |
- test/test_core_classifiers.py | |
- test/test_core_regressors.py | |
- test/test_core_transformers.py | |
python-version: ['3.10', '3.11'] | |
setup-target: ['.'] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install system packages | |
run: sudo apt-get install graphviz swig | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: Install pytest | |
run: pip install pytest | |
- name: Install latest scikit-learn, xgboost, and lightgbm | |
run: pip install --upgrade --upgrade-strategy eager scikit-learn xgboost lightgbm | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: py.test -v --capture=tee-sys ${{matrix.test-case}} | |
continue-on-error: true # we may not yet support the latest scikit-learn version | |
test_notebooks_pr: | |
name: Test Notebooks (PR) | |
needs: [static] | |
runs-on: ubuntu-latest | |
if: ${{ github.event_name == 'pull_request' }} | |
env: | |
ALL_NOTEBOOK_CATEGORIES: demo_ docs_ talk_ | |
strategy: | |
fail-fast: false | |
matrix: | |
category: | |
- demo_ | |
- docs_ | |
- talk_ | |
python-version: [3.9] | |
setup-target: ['.[full,test]'] | |
test-case: ['test/test_notebooks.py'] | |
dir: ['examples'] | |
nbexcludes: [''] | |
include: | |
- dir: 'examples/kdd22' | |
python-version: 3.9 | |
setup-target: '.[tutorial,test]' | |
test-case: 'test/test_notebooks.py' | |
# nbexcludes: '06_multobj.ipynb' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install packages | |
run: sudo apt-get install graphviz swig | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: Fix tutorial dependencies | |
if: ${{ matrix.dir == 'examples/kdd22' }} | |
run: | | |
pip install "numpy<2.0.0" "pandas<2.0.0" "xgboost<=1.5.1" | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: > | |
NOTEBOOK_EXCLUDES="${{matrix.nbexcludes}}" | |
NOTEBOOK_DIR=${{matrix.dir}} | |
NOTEBOOK_CATEGORY=${{matrix.category}} | |
py.test -v --capture=tee-sys ${{matrix.test-case}} | |
test_notebooks_master: | |
name: Test Notebooks (master) | |
needs: [static] | |
runs-on: ubuntu-latest | |
if: ${{ github.event_name == 'push' }} | |
env: | |
ALL_NOTEBOOK_CATEGORIES: demo_ docs_ talk_ | |
strategy: | |
fail-fast: false | |
matrix: | |
category: | |
- demo_ | |
- docs_ | |
- talk_ | |
python-version: [3.8, 3.9, '3.10', '3.11'] | |
setup-target: ['.[full,test]'] | |
test-case: ['test/test_notebooks.py'] | |
dir: ['examples'] | |
nbexcludes: [''] | |
include: | |
- dir: 'examples' | |
python-version: 3.8 | |
setup-target: '.[full,test]' | |
test-case: 'test/test_notebooks.py' | |
nbexcludes: 'demo_auto_pipeline.ipynb' | |
- dir: 'examples/kdd22' | |
python-version: 3.8 | |
setup-target: '.[tutorial,test]' | |
test-case: 'test/test_notebooks.py' | |
nbexcludes: '02_total.ipynb' | |
- dir: 'examples/kdd22' | |
python-version: 3.9 | |
setup-target: '.[tutorial,test]' | |
test-case: 'test/test_notebooks.py' | |
# nbexcludes: '06_multobj.ipynb' | |
- dir: 'examples/kdd22' | |
python-version: '3.10' | |
setup-target: '.[tutorial,test]' | |
test-case: 'test/test_notebooks.py' | |
# nbexcludes: '06_multobj.ipynb' | |
- dir: 'examples/kdd22' | |
python-version: '3.11' | |
setup-target: '.[tutorial,test]' | |
test-case: 'test/test_notebooks.py' | |
# nbexcludes: '06_multobj.ipynb' | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Cache pip | |
uses: actions/cache@v4 | |
with: | |
# This path is specific to Ubuntu | |
path: ${{ env.pythonLocation }} | |
# Look to see if there is a cache hit for the setup file | |
key: ${{ runner.os }}-pip-new3-${{ env.pythonLocation }}-${{ hashFiles('setup.py') }} | |
restore-keys: | | |
${{ runner.os }}-pip-new3 | |
${{ runner.os }}-new3 | |
- name: Install packages | |
run: sudo apt-get install graphviz swig | |
- name: Install numpy | |
run: pip install -U numpy | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: Fix tutorial dependencies | |
if: ${{ matrix.dir == 'examples/kdd22' }} | |
run: | | |
pip install "numpy<2.0.0" "pandas<2.0.0" "xgboost<=1.5.1" | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: > | |
NOTEBOOK_EXCLUDES="${{matrix.nbexcludes}}" | |
NOTEBOOK_DIR=${{matrix.dir}} | |
NOTEBOOK_CATEGORY=${{matrix.category}} | |
py.test -v --capture=tee-sys ${{matrix.test-case}} | |
test_fairness: | |
name: Test fairness install | |
runs-on: ubuntu-latest | |
needs: [static] | |
strategy: | |
fail-fast: false | |
matrix: | |
test-case: | |
- test/test_aif360.py | |
- test/test_aif360_ensembles.py | |
python-version: [3.8] | |
setup-target: ['.[fairness]'] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install system packages | |
run: sudo apt-get install graphviz swig | |
- name: Install pytest | |
run: pip install pytest | |
- name: Install dependencies | |
run: pip install --upgrade --upgrade-strategy eager ${{matrix.setup-target}} | |
- name: pip list packages | |
run: pip list | |
- name: show pip dependencies | |
run: | | |
pip install pipdeptree | |
pipdeptree -fl | |
- name: Run test | |
run: py.test -v --capture=tee-sys ${{matrix.test-case}} | |
deploy: | |
name: Deploy to TestPyPI | |
runs-on: ubuntu-latest | |
# This should run only on the master branch of the main repo | |
if: github.repository == 'IBM/lale' && github.ref == 'refs/heads/master' && success() | |
needs: [static, test_matrix_master, test_newer, test_fairness, test_notebooks_master, docs] | |
strategy: | |
matrix: | |
python-version: [3.8] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: pip install wheel twine | |
- name: Build distribution | |
env: | |
# integrate with the current system for timestamping versions | |
TRAVIS: " " | |
run: python setup.py sdist bdist_wheel | |
- name: Publish package to TestPyPI | |
run: twine upload -u "__token__" -p "${{ secrets.test_pypi_password }}" -r testpypi dist/* |