Fix tests, bump python version to 3.11 #127

	name: CI

	on:
	push:
	branches:
	- main
	tags:
	- '**'
	pull_request:

	jobs:

	tests:
	name: test coverage

	strategy:
	matrix:
	include:
	- python-version: "3.11"
	os: ubuntu-latest

	runs-on: ${{ matrix.os }}

	defaults:
	run:
	shell: bash -l {0}

	steps:
	- uses: actions/checkout@v4
	with:
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha }}
	- name: create and activate env
	uses: conda-incubator/setup-miniconda@v3
	with:
	activate-environment: mutis
	environment-file: environment.yml
	auto-update-conda: true
	python-version: ${{ matrix.python-version }}
	- name: install mutis
	run: \|
	pip install -e .
	- name: test coverage
	run: \|
	make test-cov
	codecov -X gcov

	docs:
	name: docs building

	strategy:
	matrix:
	include:
	- python-version: "3.11"
	os: ubuntu-latest

	runs-on: ${{ matrix.os }}

	defaults:
	run:
	shell: bash -l {0}

	steps:
	- uses: actions/checkout@v4
	with:
	fetch-depth: 0
	ref: ${{ github.event.pull_request.head.sha }}
	- name: create and activate env
	uses: conda-incubator/setup-miniconda@v3
	with:
	activate-environment: mutis
	environment-file: environment.yml
	auto-update-conda: true
	python-version: ${{ matrix.python-version }}
	- name: install mutis
	run: \|
	pip install -e .
	- name: build docs
	run: \|
	make docs-sphinx

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