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Improve help section in the xml
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Correction of the help section in the xml. First column of the tsv input should be the replicate number
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rmassei authored Jan 17, 2025
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12 changes: 12 additions & 0 deletions tools/tox_tools/dose_responses/dose_response.xml
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Expand Up @@ -65,6 +65,18 @@
- `response_column`: The name of the column in the CSV file that contains the response values
- `plot_output`: A JPG image file of the dose-response plot.
- `ec_output`: A tabular file containing the calculated EC values.
**IMPORTANT**: First column of the input must contain the replicate number. A simple input table might look as the following:
+------------+---------------+---------------+
| rep | conc | resp |
+============+===============+===============+
| 1 | 0 | 0 |
+------------+---------------+---------------+
| 2 | 10 | 50 |
+------------+---------------+---------------+
| 1 | 5 | 10 |
+------------+---------------+---------------+
]]></help>
<citations>
<citation type="doi">10.1371/journal.pone.0146021</citation>
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