enh: support .ome.tif files (no stacks supported yet) #283
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| name: Checks | |
| on: | |
| push: | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| python-version: ['3.10'] | |
| os: [macos-latest, ubuntu-latest, windows-latest] | |
| env: | |
| # Display must be available globally for linux to know where xvfb is | |
| DISPLAY: :0 | |
| PYTEST_QT_API: pyqt6 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Setup Qt6 (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt update | |
| # Install X dependencies | |
| - name: Setup xvfb (Linux) | |
| if: runner.os == 'Linux' | |
| run: | | |
| # Install X dependencies | |
| sudo apt-get install -y xvfb libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-shape0 libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 libgl1-mesa-glx libsm6 libxext6 libgl1-mesa-dev x11-utils libxkbcommon-x11-0 | |
| sudo apt-get install -y libegl1 libdbus-1-3 libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 x11-utils libxcb-cursor0 | |
| # start xvfb in the background | |
| sudo /usr/bin/Xvfb $DISPLAY -screen 0 1280x1024x24 & | |
| - name: Install dependencies | |
| run: | | |
| # prerequisites | |
| python -m pip install --upgrade pip wheel | |
| python -m pip install coverage flake8 pytest | |
| python -m pip install -r tests/requirements.txt | |
| # install dependencies | |
| pip install -e . | |
| # show installed packages | |
| pip freeze | |
| - name: Start application and print version | |
| env: | |
| # Display must be available globally for linux to know where xvfb is | |
| QT_DEBUG_PLUGINS: 1 | |
| run: | | |
| python -m impose --version | |
| - name: Test with pytest | |
| run: | | |
| pytest tests | |
| coverage run --source=impose -m pytest tests | |
| - name: Lint with flake8 | |
| run: | | |
| flake8 --exclude _version.py . | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| # There seems to be a problem with shapely/PyInstaller/macOS | |
| # - name: Create app and check if it runs (macOS) | |
| # if: runner.os == 'macOS' | |
| # working-directory: ./build-recipes | |
| # run: | | |
| # bash ./macos_build_app.sh Impose $(python -m impose --version) | |
| - name: Create app and check if it runs (Win) | |
| if: runner.os == 'windows' | |
| working-directory: ./build-recipes | |
| run: | | |
| pip install -r win_build_requirements.txt | |
| pyinstaller -y --log-level=WARN win_Impose.spec | |
| .\dist\Impose\\Impose.exe --version | |
| python win_make_iss.py | |
| iscc /Q win_impose.iss | |
| - name: Upload build artifacts | |
| if: (runner.os == 'windows' && matrix.python-version == '3.9') | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Impose_win | |
| path: | | |
| ./build-recipes/Output/*.exe |