add run_joanne.py and include in global attrs

joanne/Level_2/dicts.py

@@ -146,7 +146,7 @@ def get_global_attrs(Platform, file_time, sonde_ds):
     nc_global_attrs = {
         "title": "EUREC4A JOANNE Level-2",
         "doi": f"{joanne.data_doi}",
-        "created with": f"doi:{joanne.software_doi}",
+        "created with": f"run_joanne.py doi:{joanne.software_doi}",
         "Conventions": "CF-1.8",
         "campaign_id": "EUREC4A",
         "project_id": "JOANNE",

joanne/Level_3/dicts.py

@@ -280,7 +280,7 @@
 nc_global_attrs = {
     "title": "EUREC4A JOANNE Level-3",
     "doi": f"{joanne.data_doi}",
-    "created with": f"doi:{joanne.software_doi}",
+    "created with": f"run_joanne.py doi:{joanne.software_doi}",
     "Conventions": "CF-1.8",
     "campaign_id": "EUREC4A",
     "project_id": "JOANNE",

joanne/Level_4/dicts.py

@@ -571,7 +571,7 @@
 nc_global_attrs = {
     "title": "EUREC4A JOANNE Level-4",
     "doi": f"{joanne.data_doi}",
-    "created with": f"doi:{joanne.software_doi}",
+    "created with": f"run_joanne.py doi:{joanne.software_doi}",
     "Conventions": "CF-1.8",
     "campaign_id": "EUREC4A",
     "project_id": "JOANNE",

joanne/run_joanne.py

@@ -0,0 +1,67 @@
+import os
+import joanne
+import glob
+from pylab import size
+import joanne.Level_2.QC as qc
+
+
+data_directory = "/Users/geet/Documents/JOANNE/Data/"
+save_directory = "/Users/geet/Documents/JOANNE/Data/QC/"
+qc_dir = os.path.join(data_directory, "QC")
+
+jo_version = joanne.__version__
+
+halo_status_file = sorted(glob.glob(f"{qc_dir}*HALO*{jo_version}.nc"))
+p3_status_file = sorted(glob.glob(f"{qc_dir}*P3*{jo_version}.nc"))
+
+if (len(halo_status_file) >= 1) and (len(p3_status_file) >= 1):
+    print("QC Status files of the current version found for both P3 and HALO")
+else:
+    print(
+        "QC Status files of the current version not found for both P3 and HALO. Therefore, running QC..."
+    )
+
+    qc.run_qc(
+        data_directory=data_directory, save_directory=save_directory,
+    )
+
+
+l2_files = sorted(glob.glob(f"{data_directory}Level_2/*{jo_version}.nc"))
+
+no_of_l2_files = size(l2_files)
+
+if no_of_l2_files > 1000:
+    print(
+        f"{no_of_l2_files} Level-2 files found with the current JOANNE version. Therefore not running Level-2 script again."
+    )
+else:
+    print("Starting Level-2")
+    import joanne.Level_2.Level_2
+
+    print("Level-2 finished")
+
+
+l3_files = sorted(glob.glob(f"{data_directory}Level_3/*{jo_version}.nc"))
+
+if size(l3_files) > 0:
+    print(
+        "Level-3 file found with the current JOANNE version. Therefore not running Level-3 script again."
+    )
+else:
+    print("Starting Level-3")
+    import joanne.Level_3.Level_3
+
+    print("Level-3 finished")
+
+
+l4_files = sorted(glob.glob(f"{data_directory}Level_4/*{jo_version}.nc"))
+
+if size(l4_files) > 0:
+    print(
+        "Level-4 file found with the current JOANNE version. Therefore not running Level-4 script again."
+    )
+else:
+    print("Starting Level-4")
+    import joanne.Level_4.Level_4
+
+    print("Level-4 finished")