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Python implementation of pgMAP #32

Python implementation of pgMAP

Python implementation of pgMAP #32

Triggered via pull request December 4, 2024 01:38
Status Failure
Total duration 14m 48s
Artifacts 2

check-bioc.yml

on: pull_request
Matrix: build-check
docker-build-and-push
0s
docker-build-and-push
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6 errors and 12 warnings
windows-latest (4.4)
Failed to install 'pgmap' from local:
windows-latest (4.4)
Process completed with exit code 1.
macOS-latest (4.4)
No such keg: /opt/homebrew/Cellar/[email protected]
macOS-latest (4.4)
R CMD check found WARNINGs
macOS-latest (4.4)
Process completed with exit code 1.
ubuntu-latest (4.4)
Process completed with exit code 1.
windows-latest (4.4)
file 'Rhtslib/src/htslib-1.18/configure' did not have execute permissions: corrected
windows-latest (4.4)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (4.4)
no source files found
macOS-latest (4.4)
no source files found
macOS-latest (4.4)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (4.4)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (4.4)
Found the following significant warnings:
macOS-latest (4.4)
Subdirectory ‘src’ contains no source files.
macOS-latest (4.4)
harfbuzz 10.1.0 is already installed and up-to-date. To reinstall 10.1.0, run: brew reinstall harfbuzz
macOS-latest (4.4)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (4.4)
macOS's Gatekeeper has been disabled for this Cask
ubuntu-latest (4.4)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
Linux-biocversion-RELEASE_3_19-r-4.4-results Expired
731 MB
macOS-biocversion-RELEASE_3_19-r-4.4-results Expired
724 MB