Merge pull request #18 from EcoNumUdS/dev_book

Dev book
EcoNumUdS · Feb 11, 2024 · db77ea8 · db77ea8
2 parents b9afb2a + 80da60a
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diff --git a/README.md b/README.md
@@ -6,10 +6,18 @@
 
 - **Enseignant:** Victor Cameron
 
+## Livre du cours
+
+[![](https://img.shields.io/badge/HTML-Livre-orange)](https://econumuds.github.io/BIO500/)
+
+- Matériel de cours
+- Tutoriels
+- Exemples
+- Matériel supplémentaire
 
 ## Bloc 1: Planification de la collecte et organisation des données
 
-[![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc1/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc1/bloc1.pdf)
+[![](https://img.shields.io/badge/HTML-Livre-orange)](https://econumuds.github.io/BIO500/donnees.html) [![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc1/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc1/bloc1.pdf)
 
 - Types de données
 - Formulaires de saisie
@@ -18,15 +26,15 @@
 
 ## Bloc 2: Outils pour une science reproductible et transparente
 
-[![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc2/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc2/bloc2.pdf)
+[![](https://img.shields.io/badge/HTML-Livre-orange)](https://econumuds.github.io/BIO500/reproductibilite.html) [![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc2/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc2/bloc2.pdf)
 
 - Système de contrôle de version git
 - Le cahier de laboratoire RMarkdown
 - L'utilisation de Target pour l'automatisation des tâches
 
 ## Bloc 3: Visualisation des données
 
-[![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc3/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc3/bloc3.pdf)
+[![](https://img.shields.io/badge/HTML-Livre-orange)](https://econumuds.github.io/BIO500/visualiser.html) [![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc3/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc3/bloc3.pdf)
 
 - Les types de graphiques
 - Fonctions graphiques de base sur R
@@ -35,7 +43,7 @@
 
 ## Bloc 4: Communication scientifique
 
-[![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc4/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc4/bloc4.pdf)
+[![](https://img.shields.io/badge/HTML-Livre-orange)](https://econumuds.github.io/BIO500/communiquer.html) [![](https://img.shields.io/badge/HTML-Pr%C3%A9sentation-blue)](https://econumuds.github.io/BIO500/bloc4/) [![](https://img.shields.io/badge/PDF-Pr%C3%A9sentation-yellow)](https://econumuds.github.io/BIO500/bloc4/bloc4.pdf)
 
 - Rédaction de rapports et d'articles scientifiques
 - Mise en page

diff --git a/bloc1/02_intro.Rmd b/bloc1/02_intro.Rmd
@@ -241,6 +241,11 @@ Nous progresserons dans l'exécution du travail de session. Le travail sera divi
 
 Le matériel de cours est disponible dans le livre en ligne [https://econumuds.github.io/BIO500/](https://econumuds.github.io/BIO500/).
 
+.center[
+  <img src="assets/img/livre.jpng" height="300px"></img>
+]
+
+
 ---
 
 # Évaluation

diff --git a/livre/bases_de_donnees.qmd b/livre/bases_de_donnees.qmd
@@ -12,9 +12,6 @@ Plutôt que de stocker ces données dans un seul tableau où les répétitions p
 ```{r}
 #| echo: false
 
-# Charger la bibliothèque sp pour manipuler des données spatiales
-library(sp)
-
 # Génération de données
 n_inventaires <- 100000
 n_especes <- 100

diff --git a/makefile b/makefile
@@ -21,7 +21,7 @@ deploy:
 	done
 
 install:
-	Rscript -e 'if (!require(rmarkdown)) install.packages("rmarkdown"); if (!require(knitr)) install.packages("knitr"); if (!require(xaringan)) install.packages("xaringan"); if (!require(RSQLite)) install.packages("RSQLite"); if (!require(RPostgreSQL)) install.packages("RPostgreSQL"); if (!require(ggplot2)) install.packages("ggplot2"); if (!require(reshape2)) install.packages("reshape2");'
+	Rscript -e 'if (!require(rmarkdown)) install.packages("rmarkdown"); if (!require(knitr)) install.packages("knitr"); if (!require(xaringan)) install.packages("xaringan"); if (!require(RSQLite)) install.packages("RSQLite"); if (!require(RPostgreSQL)) install.packages("RPostgreSQL"); if (!require(ggplot2)) install.packages("ggplot2"); if (!require(reshape2)) install.packages("reshape2"); if (!require(knitr)) install.packages("knitr");'
 
 clean:
 	rm $(HTML)