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Multiple diversity types, speed-up, Julia v1.0! #27

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merged 27 commits into from
Aug 16, 2018
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@richardreeve richardreeve commented Jul 10, 2018

  • Report on diversity type in output
  • Update sub-packages and docs
  • Output necessary parameters to disambiguate
  • Speed up as we're taking too long to do diversity calculations for big systems
  • Working with Julia v1.0
  • Allow multiple diversities to be measured simultaneously

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codecov bot commented Jul 10, 2018

Codecov Report

Merging #27 into master will decrease coverage by 5.94%.
The diff coverage is 80.48%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master      #27      +/-   ##
==========================================
- Coverage   94.38%   88.43%   -5.95%     
==========================================
  Files          14       14              
  Lines         374      441      +67     
==========================================
+ Hits          353      390      +37     
- Misses         21       51      +30
Impacted Files Coverage Δ
src/GeneralisedDiversities.jl 100% <ø> (ø) ⬆️
src/Diversity.jl 16.66% <0%> (-83.34%) ⬇️
src/Iterators.jl 52.63% <0%> (-9.87%) ⬇️
src/Metacommunity.jl 93.93% <100%> (ø) ⬆️
src/Ecology.jl 100% <100%> (ø) ⬆️
src/Jost.jl 100% <100%> (ø) ⬆️
src/Hill.jl 100% <100%> (ø) ⬆️
src/EffectiveNumbers.jl 100% <100%> (ø) ⬆️
src/Interface.jl 89.65% <50%> (-1.65%) ⬇️
src/DiversityMeasure.jl 89.65% <76.47%> (-10.35%) ⬇️
... and 5 more

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@richardreeve
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Fixes #26.

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coveralls commented Jul 11, 2018

Coverage Status

Coverage decreased (-5.9%) to 88.435% when pulling 415a46b on multiple into ef0a4d5 on master.

@richardreeve richardreeve changed the title Multiple diversity types Multiple diversity types and speed-up Aug 9, 2018
@richardreeve richardreeve changed the title Multiple diversity types and speed-up Multiple diversity types, speed-up, Julia v1.0! Aug 16, 2018
@richardreeve richardreeve merged commit 917d201 into master Aug 16, 2018
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2 participants