added .bib to reimport functionality #6
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Run CI for R using https://eddelbuettel.github.io/r-ci/ | |
| name: document-and-deploy | |
| on: | |
| push: | |
| pull_request: | |
| release: | |
| env: | |
| _R_CHECK_FORCE_SUGGESTS_: "false" | |
| jobs: | |
| document-and-deploy: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Setup | |
| uses: eddelbuettel/github-actions/r-ci-setup@master | |
| - name: Bootstrap | |
| run: ./run.sh bootstrap | |
| #- name: Dependencies | |
| # run: ./run.sh install_deps | |
| - name: All Dependencies | |
| run: ./run.sh install_all | |
| - name: Create documentation | |
| run: | | |
| R -e " | |
| install.packages(c('rcmdcheck', 'roxygen2', 'devtools')); | |
| file.remove('NAMESPACE'); | |
| descr <- readLines('DESCRIPTION'); | |
| descr <- stringr::str_replace(descr, '^Date.*$', paste('Date:', Sys.Date())); | |
| writeLines(descr, 'DESCRIPTION'); | |
| roxygen2::roxygenise(); | |
| try(devtools::build_manual()) | |
| " | |
| - name: commit | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Actions" | |
| git add -f man/\* NAMESPACE | |
| git commit -m 'Documentation' || echo "No changes to commit" | |
| git push origin || echo "No changes to commit" | |
| - name: Deploy | |
| if: github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master' | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| R -e " | |
| install.packages(c('rsconnect', 'remotes')); | |
| bspm::disable(); | |
| remotes::install_github('ESHackathon/CiteSource', force = TRUE); | |
| rsconnect::setAccountInfo(name=${{secrets.SHINY_LUKAS_ACCOUNT}}, token=${{secrets.SHINY_LUKAS_TOKEN}}, secret=${{secrets.SHINY_LUKAS_SECRET}}); | |
| rsconnect::deployApp(appName = 'CiteSource_latest', appDir = './inst/shiny-app/CiteSource', forceUpdate = TRUE)" | |
| - name: Deploy release version conditionally | |
| if: github.event_name == 'release' && github.event.release.tag_name != '*test*' | |
| run: | | |
| R -e " | |
| rsconnect::deployApp(appName = 'CiteSource', appDir = './inst/shiny-app/CiteSource', forceUpdate = TRUE)" | |
| - name: Create pkgdown | |
| run: | | |
| R -e " | |
| install.packages('pkgdown'); | |
| pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)" | |
| - name: Deploy to GitHub pages 🚀 | |
| if: github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master' | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| clean: true | |
| branch: gh-pages | |
| folder: docs |