document-and-deploy-manual #2
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| # Run CI for R using https://eddelbuettel.github.io/r-ci/ | |
| name: document-and-deploy-manual | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| rversion: | |
| description: 'R version to use (compatible with shinyapps.io)' | |
| required: true | |
| default: '4.4.1' | |
| env: | |
| _R_CHECK_FORCE_SUGGESTS_: "false" | |
| jobs: | |
| document-and-deploy: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Set up R version | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ github.event.inputs.rversion }} | |
| - name: Create documentation | |
| run: | | |
| R -e " | |
| install.packages(c('rcmdcheck', 'roxygen2', 'devtools')); | |
| file.remove('NAMESPACE'); | |
| descr <- readLines('DESCRIPTION'); | |
| descr <- stringr::str_replace(descr, '^Date.*$', paste('Date:', Sys.Date())); | |
| writeLines(descr, 'DESCRIPTION'); | |
| roxygen2::roxygenise(); | |
| try(devtools::build_manual()) | |
| " | |
| - name: commit | |
| run: | | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Actions" | |
| git add -f man/\* NAMESPACE | |
| git commit -m 'Documentation' || echo "No changes to commit" | |
| git push origin || echo "No changes to commit" | |
| - name: Deploy latest from dev | |
| if: ${{ github.ref_name }} == 'dev' | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| R -e " | |
| install.packages(c('rsconnect', 'remotes')); | |
| remotes::install_github('ESHackathon/CiteSource', force = TRUE); | |
| rsconnect::setAccountInfo(name=${{secrets.SHINY_LUKAS_ACCOUNT}}, token=${{secrets.SHINY_LUKAS_TOKEN}}, secret=${{secrets.SHINY_LUKAS_SECRET}}); | |
| rsconnect::deployApp(appName = 'CiteSource_latest', appDir = './inst/shiny-app/CiteSource', forceUpdate = TRUE)" | |
| - name: Deploy stable version from main | |
| if: ${{ github.ref_name }} == 'main' || ${{ github.ref_name }} == 'master' | |
| run: | | |
| R -e " | |
| install.packages(c('rsconnect', 'remotes')); | |
| remotes::install_github('ESHackathon/CiteSource', force = TRUE); | |
| rsconnect::setAccountInfo(name=${{secrets.SHINY_LUKAS_ACCOUNT}}, token=${{secrets.SHINY_LUKAS_TOKEN}}, secret=${{secrets.SHINY_LUKAS_SECRET}}); | |
| rsconnect::deployApp(appName = 'CiteSource', appDir = './inst/shiny-app/CiteSource', forceUpdate = TRUE)" | |
| - name: Create pkgdown | |
| run: | | |
| R -e " | |
| install.packages('pkgdown'); | |
| pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)" | |
| - name: Deploy to GitHub pages 🚀 | |
| if: ${{ github.ref_name }} == 'main' || ${{ github.ref_name }} == 'master' | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| clean: true | |
| branch: gh-pages | |
| folder: docs |