Releases: ENCODE-DCC/caper
Releases · ENCODE-DCC/caper
v0.2.4
v0.2.3.4
v0.2.3.3
v0.2.3.2
v0.2.3
v0.2.2
v0.2.1.1
-
Bug fixes
--out-dir
didn't work with slurm, sge, pbs backends--singularity-cachedir
didn't work correctly ifSINGULARITY_CACHEDIR
env var is already defined.
-
added
--no-build-singularity
to prevent building singularity image before running a pipeline.- but this can lead to conflicts between tasks trying to build their own local singularity image on the same target location.
v0.2.0
-
bug fix for singularity
- added
--singularity-cachedir
to prevent repeatedly building image for every WDL task. - automatically calculate
SINGULARITY_BINDPATH
based on files in input JSON file- by finding common roots of those files
- added
-
CaperURI
- more robust method to catch HTTP_ERROR_CODE from cURL.