Fetch changed files from PR in chunks #183
Workflow file for this run
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| name: eamxx-sa | |
| on: | |
| # Runs on PRs against master | |
| pull_request: | |
| branches: [ master ] | |
| types: [opened, synchronize, ready_for_review, reopened] | |
| # Manual run is used to bless | |
| workflow_dispatch: | |
| inputs: | |
| job_to_run: | |
| description: 'Job to run' | |
| required: true | |
| type: choice | |
| options: | |
| - gcc-openmp | |
| - gcc-cuda | |
| - all | |
| bless: | |
| description: 'Generate baselines' | |
| required: true | |
| type: boolean | |
| # Add schedule trigger for nightly runs at midnight MT (Standard Time) | |
| schedule: | |
| - cron: '0 7 * * *' # Runs at 7 AM UTC, which is midnight MT during Standard Time | |
| concurrency: | |
| # Two runs are in the same group if they are testing the same git ref | |
| # - if trigger=pull_request, the ref is refs/pull/<PR_NUMBER>/merge | |
| # - for other triggers, the ref is the branch tested | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| submit: ${{ github.event_name == 'schedule' && 'true' || 'false' }} # Submit to cdash only for nightlies | |
| jobs: | |
| pre_process_pr: | |
| if: ${{ github.event_name == 'pull_request' }} | |
| runs-on: ubuntu-latest # This job can run anywhere | |
| outputs: | |
| relevant_paths: ${{ steps.check_paths.outputs.value }} | |
| labels: ${{ steps.get_labels.outputs.labels }} | |
| steps: | |
| - name: Check files modified by PR | |
| id: check_paths | |
| run: | | |
| paths=( | |
| components/eamxx | |
| components/eam/src/physics/rrtmgp | |
| components/eam/src/physics/p3/scream | |
| components/eam/src/physics/cam | |
| components/eam/src/physics/rrtmgp/external | |
| externals/ekat | |
| externals/scorpio | |
| externals/haero | |
| externals/YAKL | |
| .github/workflows/eamxx-sa-testing.yml | |
| ) | |
| pattern=$(IFS=\|; echo "${paths[*]}") | |
| # Use the GitHub API to get the list of changed files | |
| # There are page size limits, so do it in chunks | |
| page=1 | |
| while true; do | |
| response=$(curl -s -H "Authorization: token ${{ secrets.GITHUB_TOKEN }}" \ | |
| "https://api.github.com/repos/E3SM-Project/scream/pulls/${{ github.event.number }}/files?per_page=100&page=$page") | |
| # Check if the response is empty, and break if it is | |
| [ -z "$response" ] && break | |
| changed_files+=$(echo "$response" | grep -o '"filename": *"[^"]*"' | sed 's/"filename": *//; s/"//g')$'\n' | |
| # Check if there are more pages, and quite if there aren't | |
| [[ $(echo "$response" | jq '. | length') -lt 100 ]] && break | |
| page=$((page + 1)) | |
| done | |
| # Check for matches and echo the matching files (or "" if none) | |
| matching_files=$(echo "$changed_files" | grep -E "^($pattern)" || echo "") | |
| if [[ -n "$matching_files" ]]; then | |
| echo "Found relevant files: $matching_files" | |
| echo "value=true" >> $GITHUB_OUTPUT | |
| else | |
| echo "No relevant files touched by this PR." | |
| echo "value=false" >> $GITHUB_OUTPUT | |
| fi | |
| - name: Retrieve PR labels | |
| id: get_labels | |
| run: | | |
| labels="${{ join(github.event.pull_request.labels.*.name, ',') }}" | |
| echo "labels=${labels}" >> $GITHUB_OUTPUT | |
| gcc-openmp: | |
| needs: [pre_process_pr] | |
| if: | | |
| !failure() && !cancelled() && | |
| ( | |
| github.event_name == 'schedule' || | |
| ( | |
| github.event_name == 'pull_request' && | |
| needs.pre_process_pr.outputs.relevant_paths=='true' && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip gcc') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip openmp') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip eamxx-sa') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip eamxx-all') | |
| ) || ( | |
| github.event_name == 'workflow_dispatch' && | |
| github.event.inputs.job_to_run == 'gcc-openmp' || | |
| github.event.inputs.job_to_run == 'all' | |
| ) | |
| ) | |
| runs-on: [self-hosted, ghci-snl-cpu, gcc] | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| build_type: [sp, dbg, fpe, opt] | |
| name: gcc-openmp / ${{ matrix.build_type }} | |
| steps: | |
| - name: Check out the repository | |
| uses: actions/checkout@v4 | |
| with: | |
| persist-credentials: false | |
| show-progress: false | |
| submodules: recursive | |
| - name: Show action trigger | |
| uses: ./.github/actions/show-workflow-trigger | |
| - name: Set test-all inputs based on event specs | |
| run: | | |
| echo "generate=false" >> $GITHUB_ENV | |
| if [ "${{ github.event_name }}" == "workflow_dispatch" ]; then | |
| if [ "${{ inputs.bless }}" == "true" ]; then | |
| echo "generate=true" >> $GITHUB_ENV | |
| fi | |
| fi | |
| - name: Run tests | |
| uses: ./.github/actions/test-all-scream | |
| with: | |
| build_type: ${{ matrix.build_type }} | |
| machine: ghci-snl-cpu | |
| generate: ${{ env.generate }} | |
| submit: ${{ env.submit }} | |
| cmake-configs: Kokkos_ENABLE_OPENMP=ON | |
| gcc-cuda: | |
| needs: [pre_process_pr] | |
| if: | | |
| !failure() && !cancelled() && | |
| ( | |
| github.event_name == 'schedule' || | |
| ( | |
| github.event_name == 'pull_request' && | |
| needs.pre_process_pr.outputs.relevant_paths=='true' && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip gcc') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip cuda') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip eamxx-sa') && | |
| !contains(needs.pre_process_pr.outputs.labels,'CI: skip eamxx-all') | |
| ) || ( | |
| github.event_name == 'workflow_dispatch' && | |
| github.event.inputs.job_to_run == 'gcc-cuda' || | |
| github.event.inputs.job_to_run == 'all' | |
| ) | |
| ) | |
| runs-on: [self-hosted, ghci-snl-cuda, cuda, gcc] | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| build_type: [sp, dbg, opt] | |
| name: gcc-cuda / ${{ matrix.build_type }} | |
| steps: | |
| - name: Check out the repository | |
| uses: actions/checkout@v4 | |
| with: | |
| persist-credentials: false | |
| show-progress: false | |
| submodules: recursive | |
| - name: Show action trigger | |
| uses: ./.github/actions/show-workflow-trigger | |
| - name: Set test-all inputs based on event specs | |
| run: | | |
| echo "generate=false" >> $GITHUB_ENV | |
| if [ "${{ github.event_name }}" == "workflow_dispatch" ]; then | |
| if [ "${{ inputs.bless }}" == "true" ]; then | |
| echo "generate=true" >> $GITHUB_ENV | |
| fi | |
| fi | |
| - name: Run tests | |
| uses: ./.github/actions/test-all-scream | |
| with: | |
| build_type: ${{ matrix.build_type }} | |
| machine: ghci-snl-cuda | |
| generate: ${{ env.generate }} | |
| submit: ${{ env.submit }} | |
| cmake-configs: Kokkos_ARCH_VOLTA70=ON;CMAKE_CUDA_ARCHITECTURES=70 |