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name: CI/CD Build Workflow | ||
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on: | ||
push: | ||
branches: [main] | ||
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pull_request: | ||
branches: [main] | ||
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workflow_dispatch: | ||
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env: | ||
CANCEL_OTHERS: false | ||
PATHS_IGNORE: '["**/README.md", "**/docs/**"]' | ||
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jobs: | ||
pre-commit-hooks: | ||
name: lint with pre-commit | ||
runs-on: ubuntu-latest | ||
timeout-minutes: 5 | ||
steps: | ||
- id: skip_check | ||
uses: fkirc/skip-duplicate-actions@master | ||
with: | ||
cancel_others: ${{ env.CANCEL_OTHERS }} | ||
paths_ignore: ${{ env.PATHS_IGNORE }} | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Checkout Code Repository | ||
uses: actions/checkout@v4 | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Set up Python 3.10 | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: "3.10" | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
id: file_changes | ||
uses: trilom/[email protected] | ||
with: | ||
output: ' ' | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
# Run all pre-commit hooks on all the files. | ||
# Getting only staged files can be tricky in case a new PR is opened | ||
# since the action is run on a branch in detached head state | ||
name: Install and Run Pre-commit | ||
uses: pre-commit/[email protected] | ||
with: | ||
extra_args: --files ${{ steps.file_changes.outputs.files}} | ||
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build: | ||
name: test mosaic - python ${{ matrix.python-version }} | ||
runs-on: ubuntu-latest | ||
timeout-minutes: 20 | ||
defaults: | ||
run: | ||
shell: bash -l {0} | ||
strategy: | ||
matrix: | ||
python-version: ["3.10", "3.11", "3.12", "3.13"] | ||
steps: | ||
- id: skip_check | ||
uses: fkirc/skip-duplicate-actions@master | ||
with: | ||
cancel_others: ${{ env.CANCEL_OTHERS }} | ||
paths_ignore: ${{ env.PATHS_IGNORE }} | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
uses: actions/checkout@v4 | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Cache Conda | ||
uses: actions/cache@v4 | ||
env: | ||
# Increase this value to reset cache if conda-dev-spec.template has not changed in the workflow | ||
CACHE_NUMBER: 0 | ||
with: | ||
path: ~/conda_pkgs_dir | ||
key: | ||
${{ runner.os }}-${{ matrix.python-version }}-conda-${{ env.CACHE_NUMBER }}-${{ | ||
hashFiles('spec-file.txt,pyproject.toml,') }} | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Set up Conda Environment | ||
uses: conda-incubator/setup-miniconda@v3 | ||
with: | ||
activate-environment: "mosaic_ci" | ||
miniforge-version: latest | ||
channels: conda-forge | ||
channel-priority: strict | ||
auto-update-conda: true | ||
python-version: ${{ matrix.python-version }} | ||
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- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Install mosaic | ||
run: | | ||
conda create -n mosaic_dev --file dev-environment.txt \ | ||
python=${{ matrix.python-version }} | ||
conda activate mosaic_dev | ||
python -m pip install --no-deps --no-build-isolation -vv -e . | ||
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Run Tests | ||
env: | ||
CHECK_IMAGES: False | ||
run: | | ||
set -e | ||
conda activate mosaic_dev | ||
pip check | ||
python -c "import mosaic" | ||
#pytest tests | ||
- if: ${{ steps.skip_check.outputs.should_skip != 'true' }} | ||
name: Build Sphinx Docs | ||
run: | | ||
set -e | ||
conda activate mosaic_dev | ||
pip check | ||
cd docs | ||
make html |