Add support for QBOi variables

e3sm_to_cmip/lib.py

@@ -526,6 +526,7 @@ def handle_variables(
             )
             data.update(new_data)
             get_dims = False
+            print_message(new_data.keys(),"debug")
 
             if simple and not loaded_one:
                 loaded_one = True
@@ -539,8 +540,10 @@ def handle_variables(
 
                 if "lev" in new_data.keys():
                     dims = (timename, "lev", "lat", "lon")
-                elif "plev" in new_data.keys():
+                elif "plev" in new_data.keys() and "lon" in new_data.keys():
                     dims = (timename, "plev", "lat", "lon")
+                else:
+                    dims = (timename, "plev", "lat")
                 ds[outvar_name] = (dims, new_data[var_name])
                 for d in dims:
                     ds.coords[d] = new_data[d][:]
@@ -651,15 +654,24 @@ def get_dimension_data(filename, variable, levels=None, get_dims=False):
 
     # load the lon and lat and time info & bounds
     if get_dims:
-        data.update(
-            {
-                "lat": ds["lat"],
-                "lon": ds["lon"],
-                "lat_bnds": ds["lat_bnds"],
-                "lon_bnds": ds["lon_bnds"],
-                "time": ds["time"],
-            }
-        )
+        try:
+            data.update(
+                {
+                    "lat": ds["lat"],
+                    "lon": ds["lon"],
+                    "lat_bnds": ds["lat_bnds"],
+                    "lon_bnds": ds["lon_bnds"],
+                    "time": ds["time"],
+                }
+            )
+        except:
+            data.update(
+                {
+                    "lat": ds["lat"],
+                    "lat_bnds": ds["lat_bnds"],
+                    "time": ds["time"],
+                }
+            )
         try:
             time2 = ds["time2"]
         except KeyError:
@@ -752,19 +764,21 @@ def load_axis(data, levels=None, has_time=True):
             lev = cmor.axis(name, units=units, coord_vals=coord_vals)
 
     # add lon/lat
-    lat = cmor.axis(
-        "latitude",
-        units=data["lat"].units,
-        coord_vals=data["lat"].values,
-        cell_bounds=data["lat_bnds"].values,
-    )
+    if data["lat"]:
+        lat = cmor.axis(
+            "latitude",
+            units=data["lat"].units,
+            coord_vals=data["lat"].values,
+            cell_bounds=data["lat_bnds"].values,
+        )
 
-    lon = cmor.axis(
-        "longitude",
-        units=data["lon"].units,
-        coord_vals=data["lon"].values,
-        cell_bounds=data["lon_bnds"].values,
-    )
+    if data["lon"]:
+        lon = cmor.axis(
+            "longitude",
+            units=data["lon"].units,
+            coord_vals=data["lon"].values,
+            cell_bounds=data["lon_bnds"].values,
+        )
 
     if levels and time is not None:
         axes = [time, lev, lat, lon]

e3sm_to_cmip/resources/qboi_template.json

@@ -0,0 +1,85 @@
+{
+  "_control_vocabulary_file": "CMIP6_CV.json",
+
+  "_AXIS_ENTRY_FILE": "CMIP6_coordinate.json",
+
+  "_FORMULA_VAR_FILE": "CMIP6_formula_terms.json",
+
+  "_cmip6_option": "CMIP6",
+
+  "tracking_prefix": "hdl:21.14100",
+
+  "activity_id": "CMIP",
+
+  "outpath": "CMIP6",
+
+  "experiment_id": "piControl",
+
+  "sub_experiment_id": "none",
+
+  "sub_experiment": "none",
+
+  "source_type": "AOGCM AER",
+
+  "mip_era": "CMIP6",
+
+  "calendar": "noleap",
+
+  "realization_index": "1",
+
+  "initialization_index": "1",
+
+  "physics_index": "1",
+
+  "forcing_index": "1",
+
+  "project PI": "Dave Bader ([email protected])",
+
+  "data contact": "[email protected]",
+
+  "history": "Output from 20180129.DECKv1b_piControl.ne30_oEC.edison",
+
+  "comment": "",
+
+  "references": "Golaz, J.-C., L. P. Van Roekel, X. Zheng and co-authors, 2022: The DOE E3SM Model Version 2: Overview of the physical model and initial model evaluation. JAMES, doi: 10.1029/2022MS003156; http://e3sm.org",
+
+  "grid": "gs1x1",
+
+  "grid_label": "gr",
+
+  "nominal_resolution": "100 km",
+
+  "institution_id": "E3SM-Project",
+
+  "branch_time_in_parent": "0.0D0",
+
+  "branch_time_in_child": "0.0D0",
+
+  "parent_experiment_id": "piControl-spinup",
+
+  "parent_activity_id": "CMIP",
+
+  "parent_mip_era": "CMIP6",
+
+  "parent_source_id": "E3SM-1-0",
+
+  "parent_time_units": "days since 0001-01-01",
+
+  "parent_variant_label": "r1i1p1f1",
+
+  "branch_method": "Spin-up documentation",
+
+  "run_variant": "",
+
+  "source_id": "E3SM-1-0",
+
+  "source": "E3SM 1.0 (2018)",
+
+  "_history_template": "%s ;rewrote data to be consistent with <activity_id> for variable <variable_id> found in table <table_id>.",
+
+  "output_path_template": "<mip_era><activity_id><institution_id><source_id><experiment_id><_member_id><table><variable_id><grid_label><version>",
+
+  "output_file_template": "<variable_id><table><source_id><experiment_id><_member_id><grid_label>",
+
+  "license": "CMIP6 model data produced by E3SM-Project is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/). Consult https://pcmdi.llnl.gov/CMIP6/TermsOfUse for terms of use governing CMIP6 output, including citation requirements and proper acknowledgment. Further information about this data, including some limitations, can be found via the further_info_url (recorded as a global attribute in this file) and at https://pcmdi.llnl.gov/. The data producers and data providers make no warranty, either express or implied, including, but not limited to, warranties of merchantability and fitness for a particular purpose. All liabilities arising from the supply of the information (including any liability arising in negligence) are excluded to the fullest extent permitted by law."
+}

e3sm_to_cmip/util.py

@@ -35,6 +35,12 @@
     "CMIP6_CF3hr.json",
     "CMIP6_CFday.json",
     "CMIP6_fx.json",
+    "QBOi_monZ.json",
+    "QBOi_mon.json",
+    "QBOi_dayZ.json",
+    "QBOi_day.json",
+    "QBOi_6hrPt.json",
+    "QBOi_3hr.json",
 ]
 
 LAND_TABLES = ["CMIP6_Lmon.json", "CMIP6_LImon.json"]