Merge branch 'wlin/atm/v3_1950_compset' into next (PR #6053)

Add support for v3 1950 compsets This PR adds supporting files for v3 1950 compsets. Volcanic SO2 emission is 1950 eruption plus the historical average Other surface and upper level forcings set to cycle over year 1950 of the historical forcings Fixes #6016. [BFB] Non-1950 tests are not affected. * origin/wlin/atm/v3_1950_compset: Update elevated so2 forcing for lnd config for 1950 compsets Correct 1950 DMS file Add support for v3 1950 compsets
E3SM-Project · Feb 22, 2024 · 4ac1d06 · 4ac1d06
2 parents 9715a34 + 067211b
commit 4ac1d06
Show file tree

Hide file tree

Showing 6 changed files with 142 additions and 6 deletions.
diff --git a/cime_config/allactive/config_compsets.xml b/cime_config/allactive/config_compsets.xml
@@ -72,7 +72,7 @@
 
 <compset>
   <alias>WCYCL1950</alias>
-  <lname>1950SOI_EAM%CMIP6_ELM%SPBC_MPASSI_MPASO_MOSART_SGLC_SWAV</lname>
+  <lname>1950SOI_EAM%CMIP6_ELM%CNPRDCTCBCTOP_MPASSI_MPASO_MOSART_SGLC_SWAV</lname>
 </compset>
 
 <compset>

diff --git a/...onents/eam/bld/namelist_files/use_cases/1850_eam_CMIP6_chemUCI-Linoz-mam5-vbs-1pctCO2.xml b/...onents/eam/bld/namelist_files/use_cases/1850_eam_CMIP6_chemUCI-Linoz-mam5-vbs-1pctCO2.xml
@@ -15,7 +15,7 @@
 <solar_data_ymd>18500101</solar_data_ymd>
 <solar_data_type>FIXED</solar_data_type>
 
-<!-- 2010 GHG values from CMIP6 input4MIPS -->
+<!-- 1850 GHG values from CMIP6 input4MIPS -->
 <!-- <co2vmr>284.317e-6</co2vmr> The CMIP6 concentration set by CCSM_CO2_PPMV in cime/src/drivers/mct/cime_config/config_component_acme.xml -->
 <ch4vmr>808.249e-9</ch4vmr>
 <n2ovmr>273.0211e-9</n2ovmr>

diff --git a/components/eam/bld/namelist_files/use_cases/1850_eam_CMIP6_chemUCI-Linoz-mam5-vbs.xml b/components/eam/bld/namelist_files/use_cases/1850_eam_CMIP6_chemUCI-Linoz-mam5-vbs.xml
@@ -15,7 +15,7 @@
 <solar_data_ymd>18500101</solar_data_ymd>
 <solar_data_type>FIXED</solar_data_type>
 
-<!-- 2010 GHG values from CMIP6 input4MIPS -->
+<!-- 1850 GHG values from CMIP6 input4MIPS -->
 <!-- <co2vmr>284.317e-6</co2vmr> The CMIP6 concentration set by CCSM_CO2_PPMV in cime/src/drivers/mct/cime_config/config_component_acme.xml -->
 <ch4vmr>808.249e-9</ch4vmr>
 <n2ovmr>273.0211e-9</n2ovmr>

diff --git a/components/eam/bld/namelist_files/use_cases/1950_eam_CMIP6_chemUCI-Linoz-mam5-vbs.xml b/components/eam/bld/namelist_files/use_cases/1950_eam_CMIP6_chemUCI-Linoz-mam5-vbs.xml
@@ -0,0 +1,136 @@
+----- modified based on 1850 version ---- combined with 1950 use_case for V2
+
+<?xml version="1.0"?>
+<namelist_defaults>
+
+<!-- Set default output options for CMIP6 simulations -->
+<cosp_lite>.true.</cosp_lite>
+
+<!-- Atmosphere initial condition -->
+<ncdata dyn="se" hgrid="ne30np4" nlev="72" >atm/cam/inic/homme/NGD_v3atm.ne30pg2.eam.i.0001-01-01-00000.c20230106.nc</ncdata>
+<!--ncdata dyn="se" hgrid="ne0np4_northamericax4v1" nlev="72" >atm/cam/inic/homme/cami_0001-01-01_northamericax4v1_c190709.nc</ncdata -->
+
+<!-- Solar constant from CMIP6 input4MIPS -->
+<solar_data_file>atm/cam/solar/Solar_1950control_input4MIPS_c20171208.nc</solar_data_file>
+<solar_data_ymd>19500101</solar_data_ymd>
+<solar_data_type>FIXED</solar_data_type>
+
+<!-- 1950 GHG values from CMIP6 input4MIPS -->
+<!-- <co2vmr>284.317e-6</co2vmr> The CMIP6 concentration set by CCSM_CO2_PPMV in cime/src/drivers/mct/cime_config/config_component_acme.xml -->
+<ch4vmr>1163.821e-9</ch4vmr>
+<n2ovmr>289.739e-9</n2ovmr>
+<f11vmr>62.83147e-12</f11vmr>
+<f12vmr>6.382257e-12</f12vmr>
+
+<!-- For comprehensive history -->
+<history_amwg       >.true.</history_amwg>
+<history_aerosol    >.true.</history_aerosol>
+<history_aero_optics>.true.</history_aero_optics>
+
+<!-- External forcing for BAM or MAM.  CMIP6 input4mips data -->
+<ext_frc_type         >CYCLICAL</ext_frc_type>
+<ext_frc_cycle_yr     >1950</ext_frc_cycle_yr>
+<no2_ext_file         >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_NO2_aircraft_vertical_1750-2015_1.9x2.5_c20170608.nc </no2_ext_file>
+<!--  Use 1850-2014 averaged volcanic SO2 emission for 1950 -->
+<so2_ext_file         >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/so2_elev_strat_1950.nc</so2_ext_file>
+<soag0_ext_file       >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/emissions-cmip6_e3sm_SOAG0_elev_1850-2014_1.9x2.5_c20230201.nc </soag0_ext_file>
+<bc_a4_ext_file       >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_bc_a4_elev_1850-2014_c180205.nc </bc_a4_ext_file>
+<mam7_num_a1_ext_file >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a1_elev_1850-2014_c180205.nc </mam7_num_a1_ext_file>
+<num_a2_ext_file      >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a2_elev_1850-2014_c180205.nc </num_a2_ext_file>
+<mam7_num_a3_ext_file >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a4_elev_1850-2014_c180205.nc </mam7_num_a3_ext_file> <!-- This is to set num_a4 emissions -->
+<pom_a4_ext_file      >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_pom_a4_elev_1850-2014_c180205.nc </pom_a4_ext_file>
+<so4_a1_ext_file      >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_so4_a1_elev_1850-2014_c180205.nc </so4_a1_ext_file>
+<so4_a2_ext_file      >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_so4_a2_elev_1850-2014_c180205.nc </so4_a2_ext_file>
+
+<!-- Surface emissions for chemUCI-Linoz, MAM5, VBS SOA.  CMIP6 input4mips data -->
+<srf_emis_type        >CYCLICAL</srf_emis_type>
+<srf_emis_cycle_yr    >1950</srf_emis_cycle_yr>
+<c2h4_emis_file       >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_C2H4_surface_1850-2014_1.9x2.5_c20210323.nc </c2h4_emis_file>
+<c2h6_emis_file       >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_C2H6_surface_1850-2014_1.9x2.5_c20210323.nc </c2h6_emis_file>
+<c3h8_emis_file       >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_C3H8_surface_1850-2014_1.9x2.5_c20210323.nc </c3h8_emis_file>
+<ch2o_emis_file       >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_CH2O_surface_1850-2014_1.9x2.5_c20210323.nc </ch2o_emis_file>
+<ch3cho_emis_file     >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_CH3CHO_surface_1850-2014_1.9x2.5_c20210323.nc </ch3cho_emis_file>
+<ch3coch3_emis_file   >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_CH3COCH3_surface_1850-2014_1.9x2.5_c20210323.nc </ch3coch3_emis_file>
+<co_emis_file         >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_CO_surface_1850-2014_1.9x2.5_c20210323.nc </co_emis_file>
+<isop_emis_file       >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_ISOP_surface_1850-2014_1.9x2.5_c20210323.nc </isop_emis_file>
+<isop_vbs_emis_file   >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_ISOP_surface_1850-2014_1.9x2.5_c20210323.nc </isop_vbs_emis_file>
+<c10h16_emis_file     >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_MTERP_surface_1850-2014_1.9x2.5_c20230126.nc </c10h16_emis_file>
+<nox_emis_file        >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions-cmip6_e3sm_NO_surface_1850-2014_1.9x2.5_c20220425.nc </nox_emis_file>
+<dms_emis_file        >atm/cam/chem/trop_mozart_aero/emis/DMSflux.1950.1deg_latlon_conserv.POPmonthlyClimFromACES4BGC_c20171210.nc </dms_emis_file>
+<soag0_emis_file     >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/emissions-cmip6_e3sm_SOAG0_surf_1850-2014_1.9x2.5_c20230201.nc </soag0_emis_file>
+<so2_emis_file        >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_so2_surf_1850-2014_c180205.nc </so2_emis_file>
+<bc_a4_emis_file      >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_bc_a4_surf_1850-2014_c180205.nc </bc_a4_emis_file>
+<mam7_num_a1_emis_file>atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a1_surf_1850-2014_c180205.nc </mam7_num_a1_emis_file>
+<num_a2_emis_file     >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a2_surf_1850-2014_c180205.nc </num_a2_emis_file>
+<mam7_num_a3_emis_file>atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_num_a4_surf_1850-2014_c180205.nc </mam7_num_a3_emis_file> <!-- This is to set num_a4 emissions -->
+<pom_a4_emis_file     >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_pom_a4_surf_1850-2014_c180205.nc </pom_a4_emis_file>
+<so4_a1_emis_file     >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_so4_a1_surf_1850-2014_c180205.nc </so4_a1_emis_file>
+<so4_a2_emis_file     >atm/cam/chem/trop_mozart_aero/emis/DECK_ne30/cmip6_mam4_so4_a2_surf_1850-2014_c180205.nc </so4_a2_emis_file>
+<e90_emis_file        >atm/cam/chem/trop_mozart_aero/emis/chem_gases/2degrees/emissions_E90_surface_1750-2015_1.9x2.5_c20210408.nc </e90_emis_file>
+
+<airpl_emis_file></airpl_emis_file>   <!-- need to be empty, but if specifying empty here, the value would be root of input_data_path -->
+
+<!-- <tracer_cnst_filelist>this_field_is_not_used</tracer_cnst_filelist> -->
+<tracer_cnst_type    >CYCLICAL</tracer_cnst_type>
+<tracer_cnst_cycle_yr>1955</tracer_cnst_cycle_yr>
+<tracer_cnst_file    >oxid_1.9x2.5_L26_1850-2015_c20181106.nc</tracer_cnst_file>
+<tracer_cnst_filelist>''</tracer_cnst_filelist>
+<tracer_cnst_datapath>atm/cam/chem/trop_mozart_aero/oxid</tracer_cnst_datapath>
+<tracer_cnst_specifier>'prsd_O3:O3','prsd_NO3:NO3','prsd_OH:OH'</tracer_cnst_specifier>
+
+<!-- prescribed methane  -->
+<prescribed_ghg_file      >ch4_oxid_1.9x2.5_L26_1990-1999clim.c090804.nc</prescribed_ghg_file>
+<prescribed_ghg_datapath  >atm/cam/chem/methane</prescribed_ghg_datapath>
+<prescribed_ghg_type      >CYCLICAL</prescribed_ghg_type>
+<prescribed_ghg_cycle_yr  >1995</prescribed_ghg_cycle_yr>
+<prescribed_ghg_filelist  >''</prescribed_ghg_filelist>
+<prescribed_ghg_specifier>'prsd_ch4:CH4'</prescribed_ghg_specifier>
+
+<!-- rad_climate -->
+<rad_climate>
+  'A:H2OLNZ:H2O', 'N:O2:O2', 'N:CO2:CO2',
+  'A:O3:O3', 'A:N2OLNZ:N2O', 'A:CH4LNZ:CH4',
+  'N:CFC11:CFC11', 'N:CFC12:CFC12',
+  'M:mam5_mode1:$INPUTDATA_ROOT/atm/cam/physprops/mam4_mode1_rrtmg_aeronetdust_c141106.nc',
+  'M:mam5_mode2:$INPUTDATA_ROOT/atm/cam/physprops/mam4_mode2_rrtmg_c130628.nc',
+  'M:mam5_mode3:$INPUTDATA_ROOT/atm/cam/physprops/mam4_mode3_rrtmg_aeronetdust_c141106.nc',
+  'M:mam5_mode4:$INPUTDATA_ROOT/atm/cam/physprops/mam4_mode4_rrtmg_c130628.nc',
+  'M:mam5_mode5:$INPUTDATA_ROOT/atm/cam/physprops/mam5_mode5_rrtmg_sig1.2_dgnl.40_c03072023.nc'
+</rad_climate>
+
+<!-- Marine organic aerosol namelist settings -->
+<mam_mom_mixing_state>3</mam_mom_mixing_state>
+<mam_mom_cycle_yr  >1                                                                                    </mam_mom_cycle_yr  >
+<mam_mom_datapath  >'atm/cam/chem/trop_mam/marine_BGC/'                                                  </mam_mom_datapath  >
+<mam_mom_datatype  >'CYCLICAL'										 </mam_mom_datatype  >
+<mam_mom_filename  >'monthly_macromolecules_0.1deg_bilinear_latlon_year01_merge_date.nc'                 </mam_mom_filename  > <!-- Using the 2000 file, for now -->
+<mam_mom_fixed_tod >0											 </mam_mom_fixed_tod >
+<mam_mom_fixed_ymd >0											 </mam_mom_fixed_ymd >
+<mam_mom_specifier >'chla:CHL1','mpoly:TRUEPOLYC','mprot:TRUEPROTC','mlip:TRUELIPC'			 </mam_mom_specifier >
+
+<!-- Stratospheric ozone (Linoz) updated using CMIP6 input4MIPS GHG concentrations -->
+<chlorine_loading_file      >atm/cam/chem/trop_mozart/ub/Linoz_Chlorine_Loading_CMIP6_0003-2017_c20171114.nc</chlorine_loading_file>
+<chlorine_loading_fixed_ymd >19500101</chlorine_loading_fixed_ymd>
+<chlorine_loading_type      >FIXED</chlorine_loading_type>
+<linoz_data_cycle_yr        >1950</linoz_data_cycle_yr>
+<linoz_data_file            >linv3_1849-2017_CMIP6_Hist_10deg_58km_c20230705.nc</linoz_data_file>
+<linoz_data_path            >atm/cam/chem/trop_mozart/ub</linoz_data_path>
+<linoz_data_type            >CYCLICAL</linoz_data_type>
+
+<!-- Turn off ozone dry deposition, as Linoz O3v2 and ozone are not separated for now. Need to turn on ozone dry deposition when interactive tropospheric chemistry is implemented -->
+<drydep_method       >'xactive_lnd'</drydep_method>
+<drydep_list         >'O3','H2O2','CH2O','CH3OOH','NO','NO2','HNO3','HO2NO2','PAN','CO','CH3COCH3','C2H5OOH','CH3CHO','H2SO4','SO2','NO3','N2O5','SOAG0','SOAG15','SOAG24','SOAG35','SOAG34','SOAG33','SOAG32','SOAG31'</drydep_list>
+<gas_wetdep_method   >'NEU'</gas_wetdep_method>
+<gas_wetdep_list     >'C2H5OOH','CH2O','CH3CHO','CH3OOH','H2O2','H2SO4','HNO3','HO2NO2','SO2','SOAG0','SOAG15','SOAG24','SOAG35','SOAG34','SOAG33','SOAG32','SOAG31'</gas_wetdep_list>
+<fstrat_efold_list>'CH2O', 'CH3O2', 'CH3OOH', 'PAN', 'CO', 'C2H6', 'C3H8', 'C2H4', 'ROHO2', 'CH3COCH3', 'C2H5O2', 'C2H5OOH', 'CH3CHO', 'CH3CO3', 'ISOP', 'ISOPO2', 'MVKMACR', 'MVKO2'</fstrat_efold_list>
+
+<fstrat_list         >''</fstrat_list>
+
+<!-- sim_year used for CLM datasets -->
+<sim_year>1950</sim_year>
+
+<!-- land datasets -->
+<!-- Set in components/clm/bld/namelist_files/use_cases/1950_CMIP6_control.xml -->
+
+
+</namelist_defaults>
diff --git a/components/eam/cime_config/config_compsets.xml b/components/eam/cime_config/config_compsets.xml
@@ -23,12 +23,12 @@
 
   <compset>
     <alias>F1950-CICE</alias>
-    <lname>1950_EAM%CMIP6_ELM%SPBC_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV</lname>
+    <lname>1950_EAM%CMIP6_ELM%CNPRDCTCBCTOP_CICE%PRES_DOCN%DOM_SROF_SGLC_SWAV</lname>
   </compset>
 
   <compset>
     <alias>F1950</alias>
-    <lname>1950_EAM%CMIP6_ELM%SPBC_MPASSI%PRES_DOCN%DOM_MOSART_SGLC_SWAV</lname>
+    <lname>1950_EAM%CMIP6_ELM%CNPRDCTCBCTOP_MPASSI%PRES_DOCN%DOM_MOSART_SGLC_SWAV</lname>
   </compset>
 
   <compset>

diff --git a/components/elm/bld/namelist_files/namelist_defaults.xml b/components/elm/bld/namelist_files/namelist_defaults.xml
@@ -410,7 +410,7 @@ lnd/clm2/surfdata_map/surfdata_ne30np4_simyr1850_c180306.nc</fsurdat>
 lnd/clm2/surfdata_map/surfdata_ne30pg2_simyr1850_c230417_with_TOP.nc</fsurdat>
 
 <fsurdat hgrid="ne30np4.pg2"   sim_year="1950" use_crop=".false." >
-lnd/clm2/surfdata_map/surfdata_ne30pg2_simyr1950_c210729.nc</fsurdat>
+lnd/clm2/surfdata_map/surfdata_ne30pg2_simyr1950_c210729_with_TOP.nc</fsurdat>
 
 <fsurdat hgrid="ne16np4"      sim_year="1850" use_crop=".false." >
 lnd/clm2/surfdata_map/surfdata_ne16np4_simyr1850_c160108.nc</fsurdat>