[Dont Merge] GCSFuse as a sidecar #4529
Open
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## develop #4529 +/- ##
========================================
Coverage 73.99% 73.99%
========================================
Files 159 159
Lines 14784 14869 +85
Branches 1231 1213 -18
========================================
+ Hits 10939 11002 +63
- Misses 3845 3867 +22 see 15 files with indirect coverage changes Continue to review full report in Codecov by Sentry.
|
tarekmamdouh
force-pushed
the
tarek/genomic-file-access-poc
branch
from
480436b
to
8d50bcc
Compare
tarekmamdouh
changed the title
LizBaldo
reviewed
Jul 11, 2024
|
|
||
| # Start gcsfuse as a sidecar | ||
| mkdir -p /mnt/disks/bucket | ||
| docker run -d --name gcsfuse-container --privileged -u root -e PIP_USER=false --env BUCKET_NAME=genomics-public-data --device /dev/fuse:/dev/fuse --security-opt apparmor=unconfined -v /mnt/disks/bucket:/mnt/gcs-bucket:shared tarekmahmed/gcsfuse-container:latest |
There was a problem hiding this comment.
FYI, you likely want to use the --restart always option so that the volume get's mounted properly after pausing / resuming your runtime, see
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
I'm prototyping with the possibility of mounting a gcs bucket in jupyter image.
This is not intended to go to prod yet
Jira ticket: https://broadworkbench.atlassian.net/browse/[ticket_number]
Summary of changes
What
Why
Testing these changes
What to test
Who tested and where
jenkins retestorjenkins multi-test.