Added a 1-output so the fraction is really fraction of underreporting

DLab · Jan 29, 2021 · 9059f67 · 9059f67
1 parent c0506f0
commit 9059f67
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/underreport.py b/underreport.py
@@ -293,7 +293,7 @@ def run_chain_fn():
             high = np.percentile(special.logit(posterior_samples), 99.87, axis=0)
 
             final_data = pd.DataFrame(index = number_to_date([i for i in range(numeric_common[0],numeric_common[-1]+1)]))
-            final_data['mean'] = mean
-            final_data['low'] = low
-            final_data['high'] = high
+            final_data['mean'] =1- mean
+            final_data['low'] = 1-low
+            final_data['high'] = 1-high
             final_data.to_csv('output/'+str(current_region)+'.csv')