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Merge commit '477078a' into meta_reflection
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fabsugar committed Feb 16, 2023
2 parents 1259018 + 477078a commit 79a25f6
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14 changes: 7 additions & 7 deletions .github/workflows/backend-template.yml
Original file line number Diff line number Diff line change
Expand Up @@ -61,13 +61,13 @@ jobs:

steps:
- name: Checkout Colvars
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: ${{ github.event.pull_request.head.repo.full_name }}
ref: ${{ github.event.pull_request.head.sha }}

- name: Load compiler cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: |
~/.ccache
Expand All @@ -79,20 +79,20 @@ jobs:
# Using an exact key to forgo saving it in case of a match (tarring up
# is expensive); also including a date to allow a force-update.
- name: Load containers cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.apptainer
key: Linux-x86_64-containers-build-2022-10-11

- name: Checkout OpenMM (for Lepton library)
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'openmm/openmm'
ref: 'master'
path: 'openmm-source'

- name: Checkout ${{ inputs.backend_name }}
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: ${{ inputs.backend_repo }}
ref: ${{ inputs.backend_repo_ref }}
Expand All @@ -102,15 +102,15 @@ jobs:
# Only used for VMD test case
- name: Checkout VMD plugins
if: ${{ inputs.backend_name == 'VMD' }}
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: ${{ inputs.vmd_plugins_repo }}
ref: master
path: 'vmd-plugins-source'
ssh-key: ${{ secrets.private_key_vmd_plugins }}

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand Down
40 changes: 20 additions & 20 deletions .github/workflows/test-library.yml
Original file line number Diff line number Diff line change
Expand Up @@ -15,17 +15,17 @@ jobs:

steps:
- name: Checkout Colvars
uses: actions/checkout@v2
uses: actions/checkout@v3

- name: Load compiler cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.ccache
key: ${{ runner.os }}-build-basic-${{ github.sha }}
restore-keys: ${{ runner.os }}-build-basic-

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand Down Expand Up @@ -82,10 +82,10 @@ jobs:
needs: basicchecks

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Load containers cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.apptainer
key: Linux-x86_64-containers-build-doc-2022-09-03
Expand All @@ -105,7 +105,7 @@ jobs:
apptainer pull Fedora35-texlive.sif library://giacomofiorin/default/colvars_development:fedora35_texlive
- name: Checkout website repository
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/colvars.github.io'
path: 'website'
Expand All @@ -125,14 +125,14 @@ jobs:
if: ${{ ! github.event.repository.private }}

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Install build dependencies for library
run: |
sudo apt-get -y install tcl8.6-dev
- name: Checkout OpenMM (for Lepton library)
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'openmm/openmm'
ref: 'master'
Expand All @@ -159,10 +159,10 @@ jobs:
CCACHE: ccache

steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Load compiler ccache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.ccache
key: ${{ runner.os }}-build-multiple-${{ github.sha }}
Expand All @@ -171,13 +171,13 @@ jobs:
# Using an exact key to forgo saving it in case of a match (tarring up
# is expensive); also including a date to allow a force-update.
- name: Load containers cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.apptainer
key: Linux-x86_64-containers-build-2022-10-11

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand Down Expand Up @@ -356,24 +356,24 @@ jobs:
needs: basicchecks
if: needs.basicchecks.outputs.hassecrets == 'true'
steps:
- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Load containers cache
uses: actions/cache@v2
uses: actions/cache@v3
with:
path: ~/.apptainer
key: Linux-x86_64-containers-build-2022-10-11

- name: Checkout Sun compiler (Oracle Developer Studio)
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/oracle'
ssh-key: ${{ secrets.PULL_ORACLE_DEVELOPER_STUDIO }}
ref: 'master'
path: ${{github.workspace}}/oracle

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand Down Expand Up @@ -411,10 +411,10 @@ jobs:

steps:

- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand All @@ -433,10 +433,10 @@ jobs:

steps:

- uses: actions/checkout@v2
- uses: actions/checkout@v3

- name: Get small downloadable packages
uses: actions/checkout@v2
uses: actions/checkout@v3
with:
repository: 'Colvars/build-tools-packages'
ref: 'master'
Expand Down

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