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Update _config.yml
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3mmaRand authored Dec 2, 2024
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# Remote theme
remote_theme: Cloud-SPAN/metagenomics-theme

bioschemas:
"@context": "https://schema.org"
"@type": "LearningResource"
"@id": "https://cloud-span.github.io/metagenomics00-overview/"
"http://purl.org/dc/terms/conformsTo":
- "@type": CreativeWork
"@id": "https://bioschemas.org/profiles/TrainingMaterial/1.0-RELEASE"
about:
- "@id": "http://edamontology.org/topic_3174"
- "@id": "http://edamontology.org/topic_3372"
- "@id": "http://edamontology.org/topic_0769"
- "@id": "http://edamontology.org/topic_3365"
abstract: "This course teaches data analysis for metagenomics projects. It covers how to (1) generate and QC a metagenome assembly, (2)' bin’ the assembly into metagenome assembled genomes (MAGs) (also known as bins), (2)identify the taxonomy of these MAGs, and (4) calculate diversity metrics and add functional annotation to identify the products of genes identified in the assembled MAGs."
author: ["Emma Rand", "Sarah Forrester", "Annabel Cansdale", "Jorge Buenabad-Chavez", "Evelyn Greeves"]
contributor: ["James Chong", "Emma Barnes", "University of York", "Software Sustainability Institute"]
educationalLevel: "Intermediate"
identifier: "10.5281/zenodo.7505859"
name: "Cloud-SPAN Genomics Course"
url: "https://cloud-span.github.io/metagenomics00-overview"
inLanguage: "en"
keywords: "metagenomics, assembly, polishing, taxonomic annotation, binning, functional annotation, shell, command line tools, cloud computing, AWS, HPC, data analysis"
license: CC-BY 4.0
timeRequired: "PT12H"
mentions: ["Git for Windows", "Cloud-SPAN Genomics course", "Data Carpentries Genomics workshop"]

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