update deepgo configs

ChEB-AI · Dec 4, 2024 · fbb5c58 · fbb5c58
1 parent 85c47a0
commit fbb5c58
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Showing 6 changed files with 12 additions and 4 deletions.
diff --git a/configs/data/deepGO/deepgo_1_migrated_data.yml b/configs/data/deepGO/deepgo_1_migrated_data.yml
@@ -0,0 +1,4 @@
+class_path: chebai.preprocessing.datasets.deepGO.go_uniprot.DeepGO1MigratedData
+init_args:
+  go_branch: "MF"
+  max_sequence_length: 1002
diff --git a/configs/data/deepGO/deepgo_2_migrated_data.yml b/configs/data/deepGO/deepgo_2_migrated_data.yml
@@ -0,0 +1,4 @@
+class_path: chebai.preprocessing.datasets.deepGO.go_uniprot.DeepGO2MigratedData
+init_args:
+  go_branch: "MF"
+  max_sequence_length: 1000
diff --git a/configs/data/deepGO/go250.yml b/configs/data/deepGO/go250.yml
@@ -0,0 +1,3 @@
+class_path: chebai.preprocessing.datasets.go_uniprot.deepGO.GOUniProtOver250
+init_args:
+  go_branch: "BP"
diff --git a/configs/data/deepGO/go50.yml b/configs/data/deepGO/go50.yml
@@ -0,0 +1 @@
+class_path: chebai.preprocessing.datasets.deepGO.go_uniprot.GOUniProtOver50
diff --git a/configs/data/go250.yml b/configs/data/go250.yml
diff --git a/configs/data/go50.yml b/configs/data/go50.yml
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		class_path: chebai.preprocessing.datasets.deepGO.go_uniprot.GOUniProtOver50