Alpha 0.1.0

0.1.0 - Thursday, May 30, 2019

Several bugfixes and additions to multiple sub projects:

• BioFSharp (core):

  • Additional functionality:
    • GravyScore (Grand Average of Hydropathy) as additional amino acid property

• BioFSharp.IO:

  • Additional functionality:

    • GAF Parser for GO Annotation file format: Gene Association File
    • Uniprot style Fasta header parser
    • FastA to GFF3 converter functions
    • GFF3 Pretty Printer

  • BugFixes:

    • Fix OboParser just taking the last occurence of the alt_id keyword and discards previous ones.
    • Fix Fasta and GFF3 writers appending to files instead of recreating

• BioFSharp.BioTools:

  • Additional functionality:

    • TMHMM biocontainer API wrapper (TMHMM 2.0c predicts transmembrane helices in proteins)
    • FastP and Hera biocontainer API wrapper
    • IntaRNA biocontainer API wrapper (IntaRNA is a tool for prediction of various nucleotide interactions)

  • BugFixes:

    • Fix Stream entry closed error in BioContainer.tarOfStream()

• BioFSharp.ImgP:

  • Additional functionality:

    • update 3DCWT correlation calculation to loop

  • Bugfixes:

    • fix height adjustment in ricker
    • fix Ricker values for discrete time points

0.0.16 - Thursday, March 7, 2019

• Fix template files for all nuget packages:
  • use correct paths for binaries
  • update project descriptions
  • use type project to infer dependencies