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option to collate maps into separate coadds, refactor for cleanup
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@@ -1,62 +1,104 @@ | ||
#!/usr/bin/env python | ||
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import argparse as ap | ||
import os, glob | ||
from spt3g import core, maps | ||
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P = ap.ArgumentParser( | ||
description="Coadd map frames from input files into a single output map frame" | ||
) | ||
P.add_argument("inputs", nargs="+", help="Input g3 files. May be glob-able strings") | ||
P.add_argument("-o", "--output", default="map_coadd.g3", help="Output g3 file") | ||
P.add_argument( | ||
"-m", | ||
"--map-ids", | ||
nargs="+", | ||
help="Id's of map frames to include in the coadd. If not set, all map frames are included.", | ||
) | ||
P.add_argument("-i", "--output-map-id", help="Id for output coadd map frame") | ||
P.add_argument( | ||
"-w", | ||
"--weighted", | ||
action="store_true", | ||
help="Ensure that weights are applied before coadding.", | ||
) | ||
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args = P.parse_args() | ||
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args.inputs = sum([glob.glob(x) for x in args.inputs], []) | ||
args.inputs = [x for x in args.inputs if os.path.splitext(x)[-1].startswith(".g3")] | ||
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pipe = core.G3Pipeline() | ||
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pipe.Add(core.G3Reader, filename=args.inputs) | ||
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# drop metadata frames | ||
pipe.Add(lambda fr: fr.type == core.G3FrameType.Map) | ||
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# build coadded map with consistently handled weights | ||
if args.weighted: | ||
pipe.Add(maps.ApplyWeights) | ||
pipe.Add( | ||
maps.CoaddMaps, | ||
map_ids=args.map_ids, | ||
output_map_id=args.output_map_id, | ||
ensure_weighted_maps=False, | ||
) | ||
pipe.Add(lambda fr: "Id" not in fr or fr["Id"] == args.output_map_id) | ||
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# record input parameters | ||
def RecordInputs(fr): | ||
def RecordInputs(fr, coadd_id=None, map_ids=None, inputs=None): | ||
if fr.type != core.G3FrameType.Map: | ||
return | ||
fr["InputFiles"] = core.G3VectorString(args.inputs) | ||
fr["InputMapIds"] = core.G3VectorString(args.map_ids) | ||
if coadd_id and "Id" in fr and fr["Id"] != coadd_id: | ||
return | ||
fr["InputFiles"] = core.G3VectorString(inputs) | ||
fr["InputMapIds"] = core.G3VectorString(map_ids) | ||
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def coadd_maps( | ||
inputs, | ||
output="map_coadd.g3", | ||
map_ids=None, | ||
collate=False, | ||
output_map_id=None, | ||
weighted=False, | ||
): | ||
pipe = core.G3Pipeline() | ||
pipe.Add(core.G3Reader, filename=inputs) | ||
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# drop metadata frames | ||
pipe.Add(lambda fr: fr.type == core.G3FrameType.Map) | ||
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# build coadded map with consistently handled weights | ||
if weighted: | ||
pipe.Add(maps.ApplyWeights) | ||
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if collate: | ||
# coadd each map_id into a separate output frame | ||
for mid in map_ids: | ||
cid = output_map_id + mid if output_map_id else None | ||
pipe.Add( | ||
maps.CoaddMaps, | ||
map_ids=[mid], | ||
output_map_id=cid, | ||
ensure_weighted_maps=False, | ||
) | ||
pipe.Add(RecordInputs, coadd_id=cid, map_ids=[mid], inputs=inputs) | ||
pipe.Add(lambda fr: "Id" not in fr or fr["Id"].startswith(output_map_id)) | ||
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else: | ||
# coadd all map_id's into one output frame | ||
pipe.Add( | ||
maps.CoaddMaps, | ||
map_ids=map_ids, | ||
output_map_id=output_map_id, | ||
ensure_weighted_maps=False, | ||
) | ||
pipe.Add(lambda fr: "Id" not in fr or fr["Id"] == output_map_id) | ||
pipe.Add( | ||
RecordInputs, | ||
coadd_id=output_map_id, | ||
map_ids=map_ids, | ||
inputs=inputs, | ||
) | ||
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pipe.Add(core.G3Writer, filename=output) | ||
pipe.Run() | ||
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if __name__ == "__main__": | ||
import argparse as ap | ||
import os, glob | ||
|
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P = ap.ArgumentParser( | ||
description="Coadd map frames from input files into a single output map frame" | ||
) | ||
P.add_argument( | ||
"inputs", nargs="+", help="Input g3 files. May be glob-able strings" | ||
) | ||
P.add_argument("-o", "--output", default="map_coadd.g3", help="Output g3 file") | ||
P.add_argument( | ||
"-m", | ||
"--map-ids", | ||
nargs="+", | ||
help="Id's of map frames to include in the coadd. If not set, all map frames are included.", | ||
) | ||
P.add_argument( | ||
"-c", | ||
"--collate", | ||
action="store_true", | ||
help="Coadd each input map Id into a separate output map frame. In this case, the " | ||
"output map Id is treated as a prefix, with the input map Id appended to the string.", | ||
) | ||
P.add_argument("-i", "--output-map-id", help="Id for output coadd map frame") | ||
P.add_argument( | ||
"-w", | ||
"--weighted", | ||
action="store_true", | ||
help="Ensure that weights are applied before coadding.", | ||
) | ||
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pipe.Add(RecordInputs) | ||
args = P.parse_args() | ||
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pipe.Add(core.G3Writer, filename=args.output) | ||
args.inputs = sum([glob.glob(x) for x in args.inputs], []) | ||
args.inputs = [x for x in args.inputs if os.path.splitext(x)[-1].startswith(".g3")] | ||
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pipe.Run() | ||
coadd_maps(**vars(args)) |