Skip to content

Commit

Permalink
specify qsprpred version
Browse files Browse the repository at this point in the history
  • Loading branch information
sohviluukkonen committed Jul 19, 2023
1 parent 4a8330c commit b61d31a
Show file tree
Hide file tree
Showing 3 changed files with 5 additions and 6 deletions.
3 changes: 3 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,9 @@ pip install git+https://github.com/CDDLeiden/DrugEx.git@master
### Optional Dependencies

**[QSPRPred](https://github.com/CDDLeiden/QSPRPred.git)** - Optional package to install if you want to use the command line interface of DrugEx, which requires the models to be serialized with this package. It is also used by some examples in the tutorial.
```bash
pip install git+https://github.com/CDDLeiden/[email protected]
```

**[RAscore](https://github.com/reymond-group/RAscore)** - If you want to use the Retrosynthesis Accessibility Score in the desirability function.
- The installation of RAscore might downgrade the scikit-Learn packages. If this happens, scikit-Learn should be re-upgraded.
Expand Down
4 changes: 0 additions & 4 deletions setup.cfg
Original file line number Diff line number Diff line change
Expand Up @@ -13,8 +13,6 @@ classifiers =
Programming Language :: Python :: 3.9
Programming Language :: Python :: 3.8
Programming Language :: Python :: 3.7
Programming Language :: Python :: 3.6
Programming Language :: Python :: 3.5
Programming Language :: Python :: 3 :: Only
Topic :: Scientific/Engineering :: Bio-Informatics
Topic :: Scientific/Engineering :: Chemistry
Expand All @@ -33,8 +31,6 @@ install_requires =
gitpython
networkx
requests
; RAscore @ git+https://github.com/reymond-group/RAscore.git@master#egg=RAscore
; qsprpred @ git+https://github.com/CDDLeiden/QSPRPred.git@main#egg=qsprpred

# Random options
zip_safe = false
Expand Down
4 changes: 2 additions & 2 deletions tutorial/requirements.txt
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
jupyterlab
mols2grid
git+https://github.com/CDDLeiden/DrugEx.git@master#egg=drugex
git+https://github.com/CDDLeiden/QSPRPred.git@main#egg=qsprpred
git+https://github.com/martin-sicho/papyrus-scaffold-visualizer.git@main#egg=papyrus-scaffold-visualizer
git+https://github.com/CDDLeiden/QSPRPred.git@v1.3.1#egg=qsprpred
git+https://github.com/martin-sicho/papyrus-scaffold-visualizer.git@main#egg=papyrus-scaffold-visualizer

0 comments on commit b61d31a

Please sign in to comment.