A new machine learning model for the accurate prediction of antimicrobial activity of peptides
See paper:
git clone https://github.com/CDDLeiden/CalcAMP.gitThe Example directory contains Jupyter notebooks that show how to use some of the functions in this repository.
It is based on Python3 and contains function from BioPython, modlamp and PyBioMed. The most accurate model are the one used per default but other models were made using various ML algorithms.
More data can be found here too: https://doi.org/10.5281/zenodo.7588702.