Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix: throw error if trimmed fastq files are (nearly) empty #170

Draft
wants to merge 1 commit into
base: main
Choose a base branch
from

Conversation

kelly-sovacool
Copy link
Member

Changes

At end of cutadapt rules, thrown an error if the trimmed fastq files have fewer than 10 lines

Issues

resolves #118

PR Checklist

(Strikethrough any points that are not applicable.)

  • This comment contains a description of changes with justifications, with any relevant issues linked.
  • [ ] Update docs if there are any API changes.
  • Update CHANGELOG.md with a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/

@kopardev kopardev added the RENEE RepoName label Nov 22, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
RENEE RepoName
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Add QC check if no reads are left after cutadapt
2 participants