Code

fix trialization#130

Code

Merged

jihyunbak merged 35 commits intomainBouchardLab/nsds_lab_to_nwb:mainfrom fix-trializationBouchardLab/nsds_lab_to_nwb:fix-trializationCopy head branch name to clipboardMar 3, 2022

+579-501

Commits

Commits on Feb 18, 2022

• simplify tokenize method for continuous stim

  jihyunbak

  committed
  26949b4

• update .gitignore

  jihyunbak

  committed
  802ef40

• rename internal variable mark_onsets to mark_events

  jihyunbak

  committed
  97eb3f5

• add logging messages for debugging

  jihyunbak

  committed
  4e8e6f1

• pass audio_play_length with stimulus metadata

  jihyunbak

  committed
  59f9fe2

• update inputs to _tokenize method

  jihyunbak

  committed
  a48a2e8

Commits on Feb 19, 2022

• copy stimulus metadata into list_of_stimuli.yaml

  jihyunbak

  committed
  cfb6c4b

• get stimulus metadata from list_of_stimuli.yaml

  jihyunbak

  committed
  1a74c8b

Commits on Feb 22, 2022

• reorder stimuli by alphabetical order

  jihyunbak

  committed
  fbf69b8

• fix stim metadata for trialization

  jihyunbak

  committed
  b87c361

• update trial tokenization

  jihyunbak

  committed
  5a20ec9

• update logging

  jihyunbak

  committed
  5da2527

• fix mark event detection

  jihyunbak

  committed
  a3ecc28

• fix mark detection for wn2 stimulus

  Show description for a4db2cb
  jihyunbak

  committed
  a4db2cb

• remove old, ad hoc methods for wn tokenization

  jihyunbak

  committed
  1418ea5

• simplify _validate_num_stim_onsets

  jihyunbak

  committed
  319d0fa

• deprecate stim metadata mark_offset

  Show description for 3cdc363
  jihyunbak

  committed
  3cdc363

• remove wn2 stim metadata stim_values

  jihyunbak

  committed
  891c9d9

• load stim parameter values in TIMIT and Tone tokenizers

  jihyunbak

  committed
  6a10c03

• pass mark time series directly to trials manager

  jihyunbak

  committed
  818fe01

• clarify logics for mark/stimulus starting time

  jihyunbak

  committed
  d03f07b

• minor fixes

  jihyunbak

  committed
  946d09f

• update dmr tokenization, reflecting the 60s back padding

  jihyunbak

  committed
  c32bcd2

• drop unused stim metadata mark_sampling_rate

  jihyunbak

  committed
  1634bf7

Commits on Mar 2, 2022

• bring back mark_offset, fix baseline definitions back to previous behavior

  jihyunbak

  committed
  ef76e48

Commits on Mar 3, 2022

• move mark event detection to MarkManager

  jihyunbak

  committed
  910c737

• change baseline periods for tone and wn

  jihyunbak

  committed
  5772d59

• add baseline_start value for timit and dmr tokenization

  jihyunbak

  committed
  51604d8

• introduce RecManager

  jihyunbak

  committed
  66ff9c3

• minor cleanup

  jihyunbak

  committed
  7b99a7f

• do add_stimulus to nwb in StimulusOriginator

  jihyunbak

  committed
  3c7d83c

• pass stimulus file paths with other stimulus metadata

  jihyunbak

  committed
  36ced46

• make stimulus utils module

  jihyunbak

  committed
  a75bcc3

• fix mark detection after interactive check

  jihyunbak

  committed
  af96ce2

• update docs

  jihyunbak

  committed
  ec63761