Improve the ticks markign the spikes in the plotting of the recordings (

#121)
BlueBrain · Jan 17, 2023 · 85a7efd · 85a7efd
1 parent 9f6c276
commit 85a7efd
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Showing 3 changed files with 143 additions and 125 deletions.
diff --git a/bluepyefe/cell.py b/bluepyefe/cell.py
@@ -232,7 +232,7 @@ def plot_recordings(self, protocol_name, output_dir=None, show=False):
 
         fig, axs = plt.subplots(
             n_rows, n_cols,
-            figsize=[3.0 + 1.9 * int(n_cols), 2.4 * n_rows],
+            figsize=[3.0 + 2.2 * int(n_cols), 2.5 * n_rows],
             squeeze=False
         )
 

diff --git a/bluepyefe/recording.py b/bluepyefe/recording.py
@@ -359,15 +359,15 @@ def plot(
         axis_current.set_title(title, size="x-small")
 
         gen_t, gen_i = self.generate()
-        axis_current.plot(self.t, self.current, c="C0")
-        axis_current.plot(gen_t, gen_i, c="C1", ls="--")
-        axis_voltage.plot(self.t, self.voltage, c="C0")
+        axis_current.plot(self.t, self.current, c="C0", lw=0.8)
+        axis_current.plot(gen_t, gen_i, c="C1", ls="--", lw=0.8)
+        axis_voltage.plot(self.t, self.voltage, c="C0", lw=0.8)
 
         if self.peak_time is not None:
             max_v = numpy.max(self.voltage)
             for pt in self.peak_time:
                 axis_voltage.plot(
-                    [pt, pt], [max_v - 30., max_v + 10.], c="C3", ls="--", lw=0.7
+                    [pt, pt], [max_v + 5, max_v + 15], c="C3", ls="-", lw=0.5
                 )
 
         if display_xlabel:

diff --git a/examples/example_of_extraction.ipynb b/examples/example_of_extraction.ipynb