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Creation, Assembly and QC of Microbial Single Cell Genomic Data

How is a single cell genome created at the Single Cell Genomics Center? What data is associated with microbial Single Cell Genomes? This lesson will reveal all.

Lesson Setup

Navigate into your user_lab directory and clone the lesson repository:

$ cd ~/storage/user_lab/{your_username}/
$ git clone https://github.com/Bigelow-SCG-Course/Day1PM_SCG_data_intro.git

When running notebooks related to this lesson, select the 'biopy' kernel/environment in the upper right-hand corner of your notebook.