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Adds optional arguments to report k-best alignments with a NH tag
Random Tests #79: Pull request #499 synchronize by milkschen
December 25, 2024 06:21 Action required milkschen:kbest
December 25, 2024 06:21 Action required
Adds optional arguments to report k-best alignments with a NH tag
Random Tests #78: Pull request #499 synchronize by milkschen
December 25, 2024 00:17 Action required milkschen:kbest
December 25, 2024 00:17 Action required
Adds optional arguments to report k-best alignments with a NH tag
Random Tests #77: Pull request #499 opened by milkschen
December 25, 2024 00:05 Action required milkschen:kbest
December 25, 2024 00:05 Action required
Fix an issue that would cause bowtie2 to correctly process only the f…
Random Tests #76: Commit f90f4b6 pushed by ch4rr0
December 12, 2024 16:12 12m 42s bug_fixes
December 12, 2024 16:12 12m 42s
Make BAM input compatible with --interleaved, -1/2 and -U
Random Tests #75: Commit b50baa2 pushed by ch4rr0
December 11, 2024 21:39 26m 45s bug_fixes
December 11, 2024 21:39 26m 45s
Identify Windows binaries when using build and inspect wrapper scripts
Random Tests #74: Commit 04188b8 pushed by ch4rr0
November 23, 2024 00:39 28m 49s bug_fixes
November 23, 2024 00:39 28m 49s
Merge pull request #491 from sfiligoi/is2409-opt-cv
Random Tests #73: Commit b7e97e9 pushed by ch4rr0
November 15, 2024 14:53 26m 58s master
November 15, 2024 14:53 26m 58s
Add back the condition_variable based LockedQueue for low-thread setups
Random Tests #72: Pull request #491 opened by sfiligoi
September 13, 2024 21:30 26m 58s sfiligoi:is2409-opt-cv
September 13, 2024 21:30 26m 58s
Update release date
Random Tests #71: Commit 4cf8d52 pushed by ch4rr0
May 17, 2024 02:58 26m 51s master
May 17, 2024 02:58 26m 51s
Update documentation in preparation for release of v2.5.4
Random Tests #70: Commit 670e691 pushed by ch4rr0
May 15, 2024 15:48 26m 45s bug_fixes
May 15, 2024 15:48 26m 45s
Rearrange indexes in sidebar
Random Tests #69: Commit 4b537b1 pushed by ch4rr0
May 9, 2024 15:56 28m 5s master
May 9, 2024 15:56 28m 5s
Print the last successful mate parsed if mismatch in number of paired…
Random Tests #68: Commit 42281d7 pushed by ch4rr0
May 7, 2024 17:03 26m 58s bug_fixes
May 7, 2024 17:03 26m 58s
Setup BWT output streams to throw an exception if error occurs during…
Random Tests #67: Commit b22247b pushed by ch4rr0
April 26, 2024 01:52 26m 14s bug_fixes
April 26, 2024 01:52 26m 14s
Fix simple test failures
Random Tests #66: Commit 89c86d7 pushed by ch4rr0
April 26, 2024 01:11 27m 7s bug_fixes
April 26, 2024 01:11 27m 7s
Fix potential for overflow during tokenization
Random Tests #65: Commit 8c76c44 pushed by ch4rr0
April 24, 2024 15:28 27m 19s bug_fixes
April 24, 2024 15:28 27m 19s
Add support for toggling SAM Opt flags from the command line
Random Tests #64: Commit 213bfb8 pushed by ch4rr0
April 24, 2024 14:59 26m 31s bug_fixes
April 24, 2024 14:59 26m 31s
Allow bowtie2 to continue trying after partial writes, use perror for…
Random Tests #63: Commit f08f26f pushed by ch4rr0
April 21, 2024 18:45 26m 39s bug_fixes
April 21, 2024 18:45 26m 39s
Random Tests
Random Tests #62: by ch4rr0
February 27, 2024 19:01 27m 13s bug_fixes
February 27, 2024 19:01 27m 13s
Remove whitespace character preventing the removal -lrt from LDLIBS
Random Tests #61: Commit a43fa6f pushed by ch4rr0
January 17, 2024 02:35 26m 30s master
January 17, 2024 02:35 26m 30s
Remove whitespace character preventing the removal -lrt from LDLIBS
Random Tests #60: Commit a43fa6f pushed by ch4rr0
January 17, 2024 00:02 26m 3s bug_fixes
January 17, 2024 00:02 26m 3s
Disable warnings for variables that are set but unused
Random Tests #59: Commit 5da1122 pushed by ch4rr0
January 16, 2024 16:42 26m 22s bug_fixes
January 16, 2024 16:42 26m 22s
Remove librt when cross-compiling Windows on Linux
Random Tests #58: Commit 760671b pushed by ch4rr0
January 11, 2024 12:08 10m 51s bug_fixes
January 11, 2024 12:08 10m 51s
Undo change that removed libdl from SRA-enabled builds
Random Tests #57: Commit ca873ed pushed by ch4rr0
January 10, 2024 23:48 26m 42s bug_fixes
January 10, 2024 23:48 26m 42s
Add --sam-omit-prim-seq
Random Tests #56: Pull request #458 synchronize by sfiligoi
January 10, 2024 22:56 26m 45s sfiligoi:sam_nosq
January 10, 2024 22:56 26m 45s
Fix AVX2 build
Random Tests #55: Pull request #459 opened by sfiligoi
January 10, 2024 22:22 26m 10s sfiligoi:avx2_fix2401
January 10, 2024 22:22 26m 10s