-
Notifications
You must be signed in to change notification settings - Fork 17
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
imaging update: overlay_images #77
Conversation
please note github does not show that we removed |
</data> | ||
<data format="png" name="out" from_work_dir="output.png"> | ||
<filter>method_option['method'] == 'seg_contour'</filter> | ||
</data> | ||
</outputs> | ||
<tests> | ||
<test> |
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
It would be nice if you could add expect_num_outputs
https://docs.galaxyproject.org/en/latest/dev/schema.html#id94 to the tests. This is mainly to check that the filters are working on the outputs.
Thanks @thawn
The remove is shown as a renaming here. |
also fixed lint errors for the output name and label
somehow, the github CI produces a smaller png file. opened the PNG in GIMP and saved it with compression 9 and without exif data.
Thanks @thawn! |
@bgruening you are welcome |
changed default output for the method option "Segmentation mask over image" to png so that it can be directly viewed in the browser.
closes issue #75
FOR CONTRIBUTOR: