Shape-Out 2 is the successor of Shape-Out, a graphical user interface for the analysis and visualization of RT-DC data sets. For more information please visit https://zellmechanik.com/.
The documentation, including the code reference and examples, is available at shapeout2.readthedocs.io.
Installers for Windows and macOS are available at the release page.
If you have Python 3 installed, you can install Shape-Out 2 with
pip install shapeout2
Please cite Shape-Out either in-line
(...) using the analysis software Shape-Out version 2.X.X (available at https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut2).
or in a bibliography
Paul Müller and others (2019), Shape-Out version 2.X.X: Analysis software for real-time deformability cytometry [Software]. Available at https://github.com/ZELLMECHANIK-DRESDEN/ShapeOut2.
and replace 2.X.X with the version of Shape-Out that you used.
pip install -e . pip install -r tests/requirements.txt pytest tests