These instructions will get you a copy of the project up and running on your local machine.
First you should clone into this directory.
git clone [email protected]:AnzeLovse/RNAp-learn.git
Build a Docker image from Dockerfile with the following command:
docker build -t rnap .
After you have succsessfully built the image you can run it with:
docker run -ti --device "device":/dev/nvidia0 -v "pwd":/rnap -p 127.0.0.1:8888:8888 -name rnap rnap
example: docker run -ti --device /dev/nvidia0:/dev/nvidia0 -v /home/alovse/nfs/RNAp-learn:/rnap -p 127.0.0.1:8888:8888 -name rnap rnap
where device "device" is the path to your GPU and "pwd" is the path to the directory containing the notebooks
Inside the container run jupyter notebook and then connect to localhost:8889 in your browser
example run command: jupyter notebook --ip 0.0.0.0 --no-browser --allow-root --port 8889