Merge pull request #1839 from AllenInstitute/feature/1839-release-notes

.gitattributes

@@ -25,16 +25,17 @@ LICENSE whitespace=cr-at-eol
 *.tex eol=lf
 *.awk eol=lf
 
-.git*                 export-ignore
-*.sh                  export-ignore
-tools                 export-ignore
-Packages/*/tools     -export-ignore
-Packages/tests        export-ignore
-.mailmap              export-ignore
-CODEOWNERS            export-ignore
-ctags.cnf             export-ignore
-.editorconfig         export-ignore
-Packages/Artwork      export-ignore
+.git*                   export-ignore
+.pre-commit-config.yaml export-ignore
+*.sh                    export-ignore
+tools                   export-ignore
+Packages/*/tools        -export-ignore
+Packages/tests          export-ignore
+.mailmap                export-ignore
+CODEOWNERS              export-ignore
+ctags.cnf               export-ignore
+.editorconfig           export-ignore
+Packages/Artwork        export-ignore
 
 *.dot !diff
 

.github/workflows/build-pr.yml

@@ -115,6 +115,7 @@ jobs:
         uses: actions/checkout@v3
         with:
           submodules: recursive
+          fetch-depth: 0 # load all commits
       - name: Initial repo config
         run: tools/initial-repo-config.sh
       - name: Build documentation

.pre-commit-config.yaml

@@ -25,6 +25,7 @@ repos:
   - id: check-symlinks
   - id: check-yaml
   - id: destroyed-symlinks
+  - id: end-of-file-fixer
   - id: mixed-line-ending
   - id: trailing-whitespace
 - repo: https://github.com/sirosen/texthooks

Packages/Settings_template/2_DataBrowser.json

@@ -350,4 +350,4 @@
         }
     },
     "Target Window Type": "DataBrowser"
-}
+}

Packages/doc/0001-WIP-fast-sphinx-rst-update-cycle.patch

@@ -1,4 +1,4 @@
-From d8bae7390a0dd02af065fb3a9c4be43be05af063 Mon Sep 17 00:00:00 2001
+From 442b099da06bd393b5ae53211ae2c8026dcef869 Mon Sep 17 00:00:00 2001
 From: Thomas Braun <[email protected]>
 Date: Wed, 29 Mar 2023 18:18:04 +0200
 Subject: [PATCH 1/1] WIP: fast sphinx compilation without breathe
@@ -9,7 +9,7 @@ Subject: [PATCH 1/1] WIP: fast sphinx compilation without breathe
  2 files changed, 3 insertions(+), 30 deletions(-)
 
 diff --git a/Packages/doc/conf.py b/Packages/doc/conf.py
-index ad61b69d9..13385ff36 100644
+index ad61b69d90..13385ff369 100644
 --- a/Packages/doc/conf.py
 +++ b/Packages/doc/conf.py
 @@ -16,11 +16,11 @@ def get_version():
@@ -36,10 +36,10 @@ index ad61b69d9..13385ff36 100644
  cpp_id_attributes = [ 'threadsafe' ]
 
 diff --git a/tools/build-documentation.sh b/tools/build-documentation.sh
-index 1ef95581d..f0ffe5619 100755
+index 1375d65a07..f709100c55 100755
 --- a/tools/build-documentation.sh
 +++ b/tools/build-documentation.sh
-@@ -101,33 +101,6 @@ trap "rm -rf ${top_level}/Packages/doc/IPNWB" EXIT
+@@ -91,33 +91,6 @@ trap "rm -rf ${top_level}/Packages/doc/IPNWB" EXIT
  # workaround https://github.com/sphinx-contrib/images/pull/31
  mkdir _video_thumbnail
 
@@ -51,7 +51,7 @@ index 1ef95581d..f0ffe5619 100755
 -else
 -  echo "Errors building the documentation" 1>&2
 -  echo "breathe-apidoc could not be found" 1>&2
--  Failed
+-  exit 1
 -fi
 -
 -# Add labels to each group and each file
@@ -74,5 +74,5 @@ index 1ef95581d..f0ffe5619 100755
  grep "IgorPro[0-9]Nightly" $top_level/Packages/MIES_Include.ipf \
    | sed -e "s/^\/\/ //"                                         \
 -- 
-2.40.0.windows.1
+2.42.0.rc0.windows.1
 

Packages/doc/SweepFormula.rst

@@ -776,6 +776,7 @@ data
 
 method
   the method can be either
+
   * `0` for "full"
   * `1` for "instantaneous"
   * `2` for apcount
@@ -788,11 +789,13 @@ level
 
 resultType
   the result type defines what result(s) the apfrequency operation returns if the method `3` (instantaneous pair) is set.
+
   * `time` returns time intervals
   * `freq` returns frequencies.
 
 normalize
   sets the way the results get normalized
+
   * `nonorm`: no normalzation is applied (default)
   * `normoversweepsmin`: normalizes over all sweeps based on the minimum result value in all sweeps based on the current method
   * `normoversweepsmax`: normalizes over all sweeps based on the maximum result value in all sweeps based on he current method
@@ -803,6 +806,7 @@ normalize
 
 xAxisType
   if the method `3` (instantaneous pair) is set then xAxisType defines the x-axis of the data display.
+
   * `time`: the x-axis shows the occurence in time of the first peak of the pair(s), default
   * `count`: the x-axis counts the pair(s)