Update submodules and slope location. (#194)

* Update submodules and slope location. * Update slope location in CMake. * Further update subrepo * Missing include dir in CMake.
AMReX-Combustion · Aug 27, 2021 · 8e39a1f · 8e39a1f
1 parent 6ce7adf
commit 8e39a1f
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Showing 6 changed files with 9 additions and 4 deletions.
diff --git a/Submodules/AMReX-Hydro b/Submodules/AMReX-Hydro
diff --git a/Submodules/IAMR b/Submodules/IAMR
diff --git a/Submodules/PelePhysics b/Submodules/PelePhysics
diff --git a/Submodules/amrex b/Submodules/amrex
diff --git a/Tools/CMake/BuildPeleLMExe.cmake b/Tools/CMake/BuildPeleLMExe.cmake
@@ -219,6 +219,9 @@ function(build_pelelm_exe pelelm_exe_name)
        ${AMREX_HYDRO_SRC_DIR}/Utils/hydro_compute_fluxes_from_state.cpp
        ${AMREX_HYDRO_SRC_DIR}/Utils/hydro_bcs_K.H
        ${AMREX_HYDRO_SRC_DIR}/Utils/hydro_create_umac_grown.cpp
+
+       ${AMREX_HYDRO_SRC_DIR}/Slopes/hydro_slopes_K.H
+       ${AMREX_HYDRO_SRC_DIR}/Slopes/hydro_eb_slopes_${PELELM_DIM}D_K.H
   )
 
   if(PELELM_ENABLE_AMREX_EB)
@@ -295,6 +298,7 @@ function(build_pelelm_exe pelelm_exe_name)
   target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/Godunov)
   target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/MOL)
   target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/Utils)
+  target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/Slopes)
   if(PELELM_ENABLE_AMREX_EB)
      target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/EBMOL)
      target_include_directories(${pelelm_exe_name} PRIVATE ${AMREX_HYDRO_SRC_DIR}/EBGodunov)

diff --git a/Tools/Make/Make.PeleLM b/Tools/Make/Make.PeleLM
@@ -117,6 +117,7 @@ Bdirs += $(IAMR_HOME)/Source/Src_$(DIM)d
 Bdirs += $(AMREX_HYDRO_HOME)/Utils
 Bdirs += $(AMREX_HYDRO_HOME)/Godunov
 Bdirs += $(AMREX_HYDRO_HOME)/MOL
+Bdirs += $(AMREX_HYDRO_HOME)/Slopes
 ifeq ($(USE_EB), TRUE)
    Bdirs += $(AMREX_HYDRO_HOME)/Redistribution
    Bdirs += $(AMREX_HYDRO_HOME)/EBGodunov
+116 −0		.github/workflows/Reaction.yml
+20 −15		Eos/EOS.cpp
+13 −0		Eos/Fuego.H
+14 −1		Eos/GammaLaw.H
+31 −29		Eos/SRK.H
+7 −7		Reactions/Make.package
+8 −2		Reactions/arkode/reactor_arkode.cpp
+15 −15		Reactions/cvode/reactor_cvode_CPU.cpp
+10 −4		Reactions/cvode/reactor_cvode_GPU.cpp
+4 −4		Reactions/null/reactor.cpp
+115 −88		Reactions/reactor.H
+21 −20		Reactions/reactor.cpp
+3 −2		Reactions/rk64/Make.package
+0 −56		Reactions/rk64/reactor.H
+0 −293		Reactions/rk64/reactor.cpp
+296 −0		Reactions/rk64/reactor_rk64.cpp
+15 −0		Reactions/rk64/reactor_utils.H
+33 −0		Reactions/rk64/rkparams.H
+1 −1		Support/Fuego/Mechanism/Models/FFCM1_Red/mechanism.H
+2,548 −2,548		Support/Fuego/Mechanism/Models/NUIGalway/mechanism.H
+1 −1		Support/Fuego/Mechanism/Models/alzeta/mechanism.H
+2 −2		Support/Fuego/Mechanism/Models/chem-H/mechanism.H
+1 −1		Support/Fuego/Mechanism/Models/ethylene_af/mechanism.H
+2 −2		Support/Fuego/Mechanism/Models/grimech30-noArN/mechanism.H
+1 −1		Support/Fuego/Mechanism/Models/grimech30/mechanism.H
+1,504 −1,504		Support/Fuego/Mechanism/Models/heptane_lu_88sk/mechanism.H
+65 −29		Support/Fuego/Pythia/pythia-0.5/packages/fuego/fuego/serialization/c/CPickler.py
+1 −0		Testing/Exec/EosEval/GNUmakefile
+8 −1		Testing/Exec/Make.PelePhysics
+72 −2		Testing/Exec/ReactEval/main.cpp
+1 −0		Testing/Exec/TranEval/GNUmakefile
+16 −29		Transport/Constant.H
+91 −124		Transport/Simple.H
+18 −25		Transport/Sutherland.H