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Releases: AI-sandbox/snputils

v0.2.11

26 Nov 00:08
1b208a9
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What's Changed

  • Fix MSPreader bug related to dtype of chromosomes by @miriambt in #14

Full Changelog: v0.2.10...v0.2.11

v0.2.10

22 Nov 20:03
ffea32c
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What's Changed

  • Improve documentation and code of ancestry readers/writers. Solve variants_alt inconsistency. Rename phased to sum_strands and set default to False by @miriambt in #12
  • Optimize lazy execution during pvar read by @kscott-1 in #11
  • Some minor fixes and improvements mostly related to SNP readers by @salcc in #13

Full Changelog: v0.2.9...v0.2.10

v0.2.9

20 Nov 00:56
7681592
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What's Changed

  • redo pvar indexing logic & lazily load pvar file to save memory by @kscott-1 in #8
  • Add support for .pvar.zst input and output by @salcc in #9
  • Add gpu and docs extras to tox setup by @salcc in #10

New Contributors

Full Changelog: v0.2.8...v0.2.9

v0.2.8

16 Nov 19:46
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This release does not include changes to the functionalities of snputils, but updates the CI/CD pipeline and the package description.

Full Changelog: v0.2.3...v0.2.8

v0.2.3

15 Nov 23:44
b8630de
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What's Changed

  • Fix SNP writers related to pathlib. Refactor and document Ancestry Objects, SNPObject, and dim reduction classes by @miriambt in #5

Full Changelog: v0.2.2...v0.2.3

v0.2.2

15 Nov 22:16
ba17fe9
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What's Changed

  • Add project urls to pyproject.toml so they show up on PyPI sidebar by @salcc in #4
  • Integrate GitHub Actions into a single one and add README badge by @salcc in #3

Full Changelog: v0.2.1...v0.2.2

v0.2.1

15 Nov 17:34
27431f4
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What's Changed

  • Replace string-based file extension checks with pathlib and update plink version by @davidbonet in #2

Full Changelog: v0.2.0...v0.2.1

v0.2.0

08 Nov 16:06
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Initial public release!