Test matrix #176

	name: Unittest

	on: [pull_request]

	jobs:
	pytest:
	runs-on: ubuntu-latest
	strategy:
	max-parallel: 5
	matrix:
	python-version: ["3.10", "3.11", "3.12"]
	services: # Required for Slurm cluster
	mysql:
	image: mysql:8.0
	env:
	MYSQL_ROOT_PASSWORD: root
	ports:
	- "8888:3306"
	options: --health-cmd="mysqladmin ping" --health-interval=10s --health-timeout=5s --health-retries=3
	steps:
	- uses: actions/checkout@v4
	with:
	submodules: true
	- uses: ./.github/actions/setup_slurm_action # Set up medium slurm cluster
	- uses: r-lib/actions/setup-r@v2
	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies
	run: \|
	conda install -y python=${{ matrix.python-version }} # https://github.com/conda/conda/issues/13560#issuecomment-1992720842
	conda env update --file dev-env.yml --name base
	- name: Install RunSolver dependencies
	run: \|
	sudo apt-get install libnuma-dev
	sudo apt-get install numactl
	- name: Install pdflatex for report generation dependency
	run: sudo apt-get install texlive-latex-base
	- name: Run Unittest
	run: \|
	pytest --all
	- name: Archive outputs
	uses: actions/upload-artifact@v4
	if: failure()
	with:
	name: output
	path: Output/
	retention-days: 5

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