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| Original file line number | Diff line number | Diff line change |
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| /* eslint-disable no-alert, no-console */ | ||
| export default { | ||
| // Note that the setting store is included in MapContent.vue | ||
| methods: { | ||
| retrieveContextCardFromUrl: async function (url) { | ||
| // split the url to get the datasetId | ||
| const [datasetId, basePath, scaffoldPath, s3uri] = this.splitInfoFromUrl(url); | ||
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| // get the context file from scicrunch | ||
| const sciResults = await this.getContextFileFromScicrunch(datasetId, scaffoldPath); | ||
| if (!sciResults.success){ | ||
| return {} // return empty object if no context file is found (the empty object will be added to the entry) | ||
| } | ||
|
|
||
| // return the context file | ||
| const fullPath = basePath + sciResults.contextFile + s3uri; | ||
| return { | ||
| s3uri: sciResults.s3uri, | ||
| contextCardUrl: fullPath, | ||
| } | ||
| }, | ||
| splitInfoFromUrl: function (url) { | ||
| // example url: "https://mapcore-demo.org/current/sparc-api-v2/s3-resource/221/3/files/derivative/Scaffolds/mouse_colon_metadata.json", | ||
| // find the part after 's3-resource' | ||
| let s3path = url.split('s3-resource')[1]; | ||
| let basePath = url.split('files/')[0] + 'files/' // This gives us the base path for our relative path we will get from scicrunch | ||
| let scaffoldPath = url.split('files/')[1].split('?')[0] // This gives us the relative path to the file we want to get from scicrunch | ||
| let s3uri = '?' + url.split('?')[1] // This gives us the uri needed to get the file from s3 | ||
|
|
||
| // split the url by '/' | ||
| const parts = s3path.split('/'); | ||
| // remove the first part | ||
| parts.shift(); | ||
| // return the datasetId which is the first part | ||
| const datasetId = parts[0]; | ||
|
|
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| return [datasetId, basePath, scaffoldPath, s3uri]; | ||
| }, | ||
| getContextFileFromScicrunch: async function (datasetId, scaffoldPath) { | ||
| // get the context file from scicrunch | ||
| let results = await fetch(`${this.settingsStore.sparcApi}/dataset_info/using_multiple_discoverIds/?discoverIds=${datasetId}`) | ||
| .then(response => response.json()) | ||
| .then(data => { | ||
| // get the context info from the response | ||
| if (data.numberOfHits === 1) { // check if there is only one hit (We don't want to use the data if there are multiple hits) | ||
| const contextFile = data.results[0]['abi-contextual-information'] | ||
|
|
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| // check if there is only one context file and if so return it | ||
| if ( contextFile && contextFile.length === 1) { | ||
| return { | ||
| success: true, | ||
| contextFile: contextFile[0], | ||
| s3uri: data.results[0]['s3uri'] | ||
| } | ||
| } | ||
|
|
||
| // If there are multiple context files, find the one that matches the scaffold path | ||
| else if (contextFile && contextFile.length > 1) { | ||
| let search = this.findContextInforForFilePath(data.results[0]['abi-context-file'], scaffoldPath); | ||
| if (search) { | ||
| return { | ||
| success: true, | ||
| contextFile: search, | ||
| s3uri: data.results[0]['s3uri'] | ||
| } | ||
| } | ||
| } | ||
| } | ||
| return {success: false}; | ||
| }).catch(error => { | ||
| console.error('Error:', error); | ||
| return {success: false}; | ||
| }); | ||
| return results; | ||
| }, | ||
| findContextInforForFilePath: function (dataciteInfo, filePath) { | ||
| // find the context file that matches the scaffold path | ||
| let result = dataciteInfo.find((info) => info.datacite.isDerivedFrom.path.includes(filePath)) | ||
| return result?.dataset?.path | ||
| } | ||
| } | ||
| } |