overview and .bib updated

3mmaRand · Sep 3, 2024 · 3e6a591 · 3e6a591
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diff --git a/CITATION.cff b/CITATION.cff
@@ -5,7 +5,7 @@ authors:
   given-names: "Emma"
   orcid: "https://orcid.org/0000-0002-1358-8275"
 title: "Data Analysis for Group Project"
-version: 0.1
+version: 1.0
 doi: 
-date-released: 2023-08-01
+date-released: 2024-09-30
 url: "https://3mmarand.github.io/BIO00088H-data/"
diff --git a/_quarto.yml b/_quarto.yml
@@ -14,7 +14,7 @@ website:
   google-analytics: "G-TVF95J593T"
 
   page-footer:
-    left: "Rand E (2023). Data Analysis for Group Project. <https://3mmarand.github.io/BIO00088H-data/>."
+    left: "Rand E (2024). Data Analysis for Group Project. <https://3mmarand.github.io/BIO00088H-data/>."
     right:
       - icon: twitter
         href: https://twitter.com/er_13

diff --git a/index.qmd b/index.qmd
@@ -11,30 +11,30 @@ You are *either*
 -   an integrated masters student doing BIO00088H Group Research Project *or*
 -   an MSc Bioinformatics student doing BIO00070M Research, Professional and Team Skills
 
-For students doing BIO00088H, Data Analysis compromises six workshops covering computational skills needed in your project. Three of these are core and taken by everyone and three are specific to your project type. MSc Bioinformatics students do the Core workshops and the 'omics workshops as part of BIO00070M.
+Integrated masters students doing 88H will be doing one of these projects:
 
 The project types are:
 
-| Project                                 | Data Strand                     |
-|----------------------------------------|--------------------------------|
-| Stem Cells, Jillian Barlow              | 'omics, Emma Rand               |
-| Developmental Biology, Betsy Pownal     | 'omics, Emma Rand               |
-| Microbial Ecology, Kelly Redeker        | 'omics, Emma Rand               |
-| Structural Biochemistry, Michael Plevin | molecular-structure, Jon Agirre |
-| Neuroscience, Sean Sweeney              | image-analysis, Richard Bingham |
-| xxxxxxxxxxxx, Richard Maguire           | image-analysis, Richard Bingham |
-
-The data analysis workshops are:
-
-| Week | Data Strand                                          |
-|------|------------------------------------------------------|
-| 1    | Core 1 Organising reproducible data analyses         |
-| 2    | Core 2 File types, workflow tips and other tools     |
-| 3    | omics/structure/images 1                             |
-| 4    | omics/structure/images 2                             |
-| 5    | omics/structure/images 3                             |
-| 6    | Drop-in                                              |
-| 6    | Core 3 Research Compendia and Reproducible Reporting |
+| Title                                                                         | Director        | Data analysis strand            |
+|--------------------------------------|------------|----------------------|
+| Identifying transcriptional targets of FGF signalling in Xenopus embryos.     | Betsy Pownall   | Transcriptomics, Emma Rand      |
+| Investigating the differentiation of stem cells in healthy bone marrow        | Jillian Barlow  | Transcriptomics, Emma Rand      |
+| Investigating  pathways involved in the Nickel detoxification in Willow       | Liz Rylott      | Transcriptomics, Emma Rand      |
+| Investigating differential RNA expression through the Leishmania lifecycle    | Pegine Walrad   | Transcriptomics, Emma Rand      |
+| Identifying novel proteins regulating synaptophagy                            | Richard Maguire | Image analysis, Richard Bingham |
+| Defining pathological cascades in dopaminergic neurons in a Parkinson's model | Sean Sweeney    | Image analysis, Richard Bingham |
+| Discovery proteins for biotech applications: new classes of antibody mimetics | Michael Plevin  | Structure Analysis, Jon Agirre  |
+
+Data Analysis compromises five workshops covering computational skills needed in your project. MSc Bioinformatics students do the Core workshops and the transcriptomics workshops as part of BIO00070M. The data analysis workshops are:
+
+| Week | Data Strand                                                                                            |
+|---------------|---------------------------------------------------------|
+| 2    | Core 1 Supporting Information - reproducibility, project-oriented workflow, naming things,             |
+| 3    | Strand specific 1                                                                                      |
+| 4    | Strand specific 2                                                                                      |
+| 5    | Strand specific 3                                                                                      |
+| 6    | Core 2 Supporting Information - documenting, curating, cool code, handy shortcuts, non-coded processes |
+|      |                                                                                                        |
 
 ## Module Learning Outcome linked to this content
 
@@ -48,4 +48,4 @@ All material is on the VLE so why is this site useful? This site collects everyt
 
 ## Please cite as
 
-Rand E (2023). Data Analysis for Group Project. https://3mmarand.github.io/BIO00088H-data/.
+Rand E (2024). Data Analysis for Group Project. https://3mmarand.github.io/BIO00088H-data/.