-
Notifications
You must be signed in to change notification settings - Fork 0
/
readme.txt
26 lines (26 loc) · 1 KB
/
readme.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
#################################################################
# sciDV - iteractive Data Visualization for single cell RNA-Seq
#################################################################
# Rdata file should include the following datasets
# Notice: Variable names should not be changed
## data_expr
- data.frame()
of which rownames are gene names
and colnames are sample names
## data_annot
- data.frame(),
of which rownames are sample names (identical to colnames of data_expr)
and colnames are annotation names
## data_color
- list(),
of which names should be among annotation names of data_annot;
each sublist should be a vector named by categories of
cooresponding annotation
## data_subcat
- vector(),
including annotation names used for subsetting samples
## data_coord
- list(),
of which names should be among both annotation names of
Coordinate-Type-columns in data_annot.
#################################################################