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FlashMatrix.bib
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year = {2013},
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author = {Da Zheng and Randal Burns and Alexander S. Szalay},
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year={2012},
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booktitle = {Presented as part of the 9th USENIX Symposium on Networked Systems Design and Implementation (NSDI 12)},
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@misc{mkl,
key={MKL},
title={Intel Math Kernel Library},
howpublished={\url{https://software.intel.com/en-us/intel-mkl}},
year={Accessed 1/24/2016},
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author={Qian Wang and Xianyi Zhang and Yunquan Zhang and Qing Yi},
booktitle={High Performance Computing, Networking, Storage and Analysis (SC), 2013 International Conference for},
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year={2013},
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@article{elemental,
author = {Poulson, Jack and Marker, Bryan and van de Geijn, Robert A. and Hammond, Jeff R. and Romero, Nichols A.},
title = {Elemental: A New Framework for Distributed Memory Dense Matrix Computations},
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title = {Abstract Machine Models and Proxy Architectures for Exascale Computing},
booktitle = {Proceedings of the 1st International Workshop on Hardware-Software Co-Design for High Performance Computing},
series = {Co-HPC '14},
year = {2014},
publisher = {IEEE Press},
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@inproceedings{mapreduce,
author = {Dean, Jeffrey and Ghemawat, Sanjay},
title = {{MapReduce}: Simplified Data Processing on Large Clusters},
booktitle = {Proceedings of the 6th Conference on Symposium on Opearting Systems Design \& Implementation - Volume 6},
series = {OSDI'04},
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@inproceedings{pig,
author = {Olston, Christopher and Reed, Benjamin and Srivastava, Utkarsh and Kumar, Ravi and Tomkins, Andrew},
title = {{Pig Latin}: A Not-so-foreign Language for Data Processing},
booktitle = {Proceedings of the 2008 ACM SIGMOD International Conference on Management of Data},
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@inproceedings{flumejava,
author = {Chambers, Craig and Raniwala, Ashish and Perry, Frances and Adams, Stephen and Henry, Robert R. and Bradshaw, Robert and Weizenbaum, Nathan},
title = {{FlumeJava}: Easy, Efficient Data-parallel Pipelines},
booktitle = {Proceedings of the 31st ACM SIGPLAN Conference on Programming Language Design and Implementation},
year = {2010},
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@inproceedings{systemml,
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booktitle = {Proceedings of the 2011 IEEE 27th International Conference on Data Engineering},
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@inproceedings{dryad,
author = {Isard, Michael and Budiu, Mihai and Yu, Yuan and Birrell, Andrew and Fetterly, Dennis},
title = {Dryad: Distributed Data-parallel Programs from Sequential Building Blocks},
booktitle = {Proceedings of the 2Nd ACM SIGOPS/EuroSys European Conference on Computer Systems 2007},
year = {2007},
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@inproceedings{dryadlinq,
author = {Yu, Yuan and Isard, Michael and Fetterly, Dennis and Budiu, Mihai and Erlingsson, \'{U}lfar and Gunda, Pradeep Kumar and Currey, Jon},
title = {{DryadLINQ}: A System for General-purpose Distributed Data-parallel Computing Using a High-level Language},
booktitle = {Proceedings of the 8th USENIX Conference on Operating Systems Design and Implementation},
year = {2008},
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@inproceedings{riot,
author = {Zhang, Yi and Herodotou, Herodotos and Yang, Jun},
title = {{RIOT}: {I/O}-Efficient Numerical Computing without {SQL}},
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@inproceedings{presto,
author = {Venkataraman, Shivaram and Bodzsar, Erik and Roy, Indrajit and AuYoung, Alvin and Schreiber, Robert S.},
title = {Presto: Distributed Machine Learning and Graph Processing with Sparse Matrices},
booktitle = {Proceedings of the 8th ACM European Conference on Computer Systems},
year = {2013},
publisher = {ACM},
address = {New York, NY, USA},
}
@ARTICLE{atlas,
author = {R. Clint Whaley and Antoine Petitet and Jack J. Dongarra},
title = {Automated Empirical Optimization of Software and the ATLAS Project},
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@article{Wilkes01,
author = {Wilkes, Maurice V.},
title = {The Memory Gap and the Future of High Performance Memories},
journal = {SIGARCH Comput. Archit. News},
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publisher = {ACM},
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@article{Goto,
author = {Goto, Kazushige and Geijn, Robert A. van de},
title = {Anatomy of High-performance Matrix Multiplication},
journal = {ACM Trans. Math. Softw.},
volume = {34},
number = {3},
month = may,
year = {2008},
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publisher = {ACM},
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@misc{avx,
author = {Chris Lomont},
title = {Introduction to Intel Advanced Vector Extensions},
howpublished = {\url{https://software.intel.com/en-us/articles/introduction-to-intel-advanced-vector-extensions}},
month = June,
year = 2011
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@article{FlashEigen,
author = {Da Zheng and Randal Burns and Joshua Vogelstein and Carey E. Priebe and Alexander S. Szalay},
title = {An {SSD}-based eigensolver for spectral analysis on billion-node graphs},
journal = {CoRR},
volume = {abs/1602.01421},
year = {2016},
}
@misc{mpi,
author = {Blaise Barney},
title = {Message Passing Interface ({MPI})},
howpublished = {\url{https://computing.llnl.gov/tutorials/mpi/}},
month = June,
year = 2015
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@misc{openmp,
title = {{OpenMP}},
howpublished = {\url{http://openmp.org/wp/}},
month = March,
year = 2016
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@misc{gmm,
author = {Douglas Reynolds},
title = {{Gaussian Mixture Models}},
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@article{anasazi,
author = {Baker, C. G. and Hetmaniuk, U. L. and Lehoucq, R. B. and Thornquist, H. K.},
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publisher = {ACM},
}
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year={2008},
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volume={14},
number={1},
title={Top 10 algorithms in data mining},
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@article{mllib,
author = {Xiangrui Meng and Joseph Bradley and Burak Yavuz and Evan Sparks and Shivaram Venkataraman and Davies Liu and Jeremy Freeman and DB Tsai and Manish Amde and Sean Owen and Doris Xin and Reynold Xin and Michael J. Franklin and Reza Zadeh and Matei Zaharia and Ameet Talwalkar},
title = {{MLlib}: Machine Learning in {Apache Spark}},
journal = {CoRR},
volume = {abs/1505.06807},
year = {2015},
}
@article{SEM_SpMM,
author = {Da Zheng and Disa Mhembere and Vince Lyzinski and Joshua Vogelstein and Carey E. Priebe and Randal Burns},
title = {Semi-External Memory Sparse Matrix Multiplication on Billion-node Graphs in a Multicore Architecture},
journal = {CoRR},
volume = {abs/1602.02864},
year = {2016},
}
@inproceedings{friendster,
author = {Yang, Jaewon and Leskovec, Jure},
title = {Defining and Evaluating Network Communities Based on Ground-truth},
booktitle = {Proceedings of the ACM SIGKDD Workshop on Mining Data Semantics},
year = {2012},
}
@article{Luxburg07,
author = {Luxburg, Ulrike},
title = {A Tutorial on Spectral Clustering},
journal = {Statistics and Computing},
volume = {17},
number = {4},
month = dec,
year = {2007},
publisher = {Kluwer Academic Publishers},
address = {Hingham, MA, USA},
}
@inproceedings{gmm,
author = {TIMOTHY L. BAILEY and CHARLES ELKAN},
title = {Fitting a mixture model by expectation maximization to discover motifs in biopolymers},
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year = {1994},
}
@article{mclust,
author = {Chris Fraley and Adrian E. Raftery and T. Brendan Murphy and Luca Scrucca},
title = {mclust Version 4 for {R}: Normal Mixture Modeling for Model-Based Clustering, Classification, and Density Estimation},
journal = {Technical Report No. 597 , Department of Statistics, University of Washington},
year = {2012},
}
@article{NSCI,
author = {BARACK OBAMA},
title = {Executive Order -- Creating a National Strategic Computing Initiative},
journal = {The White House Office of the Press Secretary},
year = {2015},
}
@inproceedings{burst,
author = {Liu, Ning and Cope, Jason and Carns, Philip and Carothers, Christopher and Ross, Robert and Grider, Gary and Crume, Adam and Maltzahn, Carlos},
title = {On the Role of Burst Buffers in Leadership-class Storage Systems},
booktitle = {MSST/SNAPI},
year = {2012},
}
@misc{rre,
key={Revolution R},
title={Revolution {R Enterprise}},
howpublished={\url{http://www.revolutionanalytics.com/revolution-r-enterprise}},
year={Accessed 4/9/2016},
}
@misc{matlab,
key={},
title={Parallel Computing Toolbox in {MATLAB}},
howpublished={\url{http://www.mathworks.com/products/parallel-computing/}},
year={Accessed 4/9/2016},
}
@inproceedings{naiad,
author = {Murray, Derek G. and McSherry, Frank and Isaacs, Rebecca and Isard, Michael and Barham, Paul and Abadi, Mart\'{\i}n},
title = {Naiad: A Timely Dataflow System},
booktitle = {Proceedings of the Twenty-Fourth ACM Symposium on Operating Systems Principles},
series = {SOSP '13},
year = {2013},
pages = {439--455},
publisher = {ACM},
address = {New York, NY, USA},
}
@ARTICLE{Jain00,
author={A. K. Jain and R. P. W. Duin and Jianchang Mao},
journal={IEEE Transactions on Pattern Analysis and Machine Intelligence},
title={Statistical pattern recognition: a review},
year={2000},
volume={22},
number={1},
pages={4-37},
month={Jan},
}
@inproceedings{cor,
author = {Karl Pearson},
title = {Notes on regression and inheritance in the case of two parents},
booktitle = {Proceedings of the Royal Society of London},
year = {1895},
pages = {240-242},
}