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DESCRIPTION
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DESCRIPTION
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Package: NFP
Type: Package
Title: Network Fingerprint Framework in R
Version: 0.99.4
Authors@R: c(
person("Yang", "Cao",email = "[email protected]",role = c("aut","cre" )),
person("Fei", "Li", email = "[email protected]", role = "aut")
)
Maintainer: Yang Cao <[email protected]>
Description: An implementation of the network fingerprint framework that introduced
in paper "Network fingerprint: a knowledge-based characterization of biomedical
networks" (Cui, 2015) <doi:10.1038/srep13286>. This method worked by making
systematic comparisons to a set of well-studied "basic networks", measuring
both the functional and topological similarity. A biological could be
characterized as a spectrum-like vector consisting of similarities to basic
networks. It shows great potential in biological network study.
Depends:
R (>= 3.2.0),
graph
Imports:
igraph,
stringr,
magrittr,
plyr,
ggplot2,
apcluster,
KEGGgraph,
dplyr,
tidyr,
methods
Suggests:
knitr,
testthat,
graphite,
NFPdata,
rmarkdown
Additional_repositories: https://yiluheihei.github.io/datarepo/
VignetteBuilder: knitr
License: GPL (>= 2)
LazyData: yes
LazyDataCompression: xz
NeedsCompilation: no
RoxygenNote: 7.1.1
URL: https://github.com/yiluheihei/NFP
BugReports: https://github.com/yiluheihei/NFP/issues