forked from AllenInstitute/scrattch.io
-
Notifications
You must be signed in to change notification settings - Fork 0
/
tome_structure.txt
59 lines (59 loc) · 1.37 KB
/
tome_structure.txt
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
/ - root
data/ : write_tome_data()
exon/
dims
i
p
x
exon_lengths - a vector object
intron/
dims
i
p
x
intron_lengths - a vector object
t_exon/
dims
i
p
x
t_intron/
dims
i
p
x
total_exon_counts - a vector object
total_intron_counts - a vector object
dend/
[dend_name]/
nodes - a data.frame object
segments - a data.frame object
desc - a data.frame object
gene_meta/
gene/
[gene_columns] - vector objects
desc - a data.frame object
gene_names - a vector object : write_tome_data()
log - a data.frame object
mapping/
[mapping_name]/
memb - a data.frame object
desc - a data.frame object
projection/
[projection_name] - a data.frame object : write_tome_projection()
desc - a data.frame object : write_tome_projection_desc()
sample_meta/
anno/ : write_tome_anno()
[anno_columns] - vector objects
desc - a data.frame object : write_tome_anno_desc()
sample_names - a vector object : write_tome_data()
stats/
count_gt0 - a data.frame object : write_tome_stats()
count_gt1 - a data.frame object : write_tome_stats()
count_n - a data.frame object : write_tome_stats()
medians - a data.frame object : write_tome_stats()
sums - a data.frame object : write_tome_stats()
desc - a data.frame object : write_tome_stats_desc()
tome_meta/
citation - a data.frame object
desc - a data.frame object