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modules.json
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modules.json
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{
"name": "nf-core/chipseq",
"homePage": "https://github.com/nf-core/chipseq",
"repos": {
"nf-core/modules": {
"git_url": "https://github.com/nf-core/modules.git",
"modules": {
"bowtie2/align": {
"branch": "master",
"git_sha": "848ee9a215d02d80be033bfa60881700f2bd914c"
},
"bowtie2/build": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"bwa/index": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"bwa/mem": {
"branch": "master",
"git_sha": "4f5274c3de0c9521f5033893ff61057a74c45ba9"
},
"chromap/chromap": {
"branch": "master",
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"chromap/index": {
"branch": "master",
"git_sha": "dbb46c9b635080b132bab4b8d5b9a14f0d1c22e7"
},
"custom/dumpsoftwareversions": {
"branch": "master",
"git_sha": "e5b44499efcf6f7fb24874886bac60591c5d94dd"
},
"custom/getchromsizes": {
"branch": "master",
"git_sha": "213403187932dbbdd936a04474cc8cd8abae7a08"
},
"deeptools/computematrix": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"deeptools/plotfingerprint": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"deeptools/plotheatmap": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"deeptools/plotprofile": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"fastqc": {
"branch": "master",
"git_sha": "49b18b1639f4f7104187058866a8fab33332bdfe"
},
"gffread": {
"branch": "master",
"git_sha": "e745e167c1020928ef20ea1397b6b4d230681b4d"
},
"gunzip": {
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},
"homer/annotatepeaks": {
"branch": "master",
"git_sha": "233fa70811a03a4cecb2ece483b5c8396e2cee1d"
},
"khmer/uniquekmers": {
"branch": "master",
"git_sha": "82fdff4fb4ce6cafcc028a7503da835427f35352"
},
"macs2/callpeak": {
"branch": "master",
"git_sha": "f0800157544a82ae222931764483331a81812012"
},
"phantompeakqualtools": {
"branch": "master",
"git_sha": "233fa70811a03a4cecb2ece483b5c8396e2cee1d"
},
"picard/collectmultiplemetrics": {
"branch": "master",
"git_sha": "682f789f93070bd047868300dd018faf3d434e7c"
},
"picard/markduplicates": {
"branch": "master",
"git_sha": "682f789f93070bd047868300dd018faf3d434e7c"
},
"picard/mergesamfiles": {
"branch": "master",
"git_sha": "682f789f93070bd047868300dd018faf3d434e7c"
},
"preseq/lcextrap": {
"branch": "master",
"git_sha": "7111e571cc5b6069de4673cd6165af680f17b4d7"
},
"samtools/flagstat": {
"branch": "master",
"git_sha": "ecece498f10b47b7c9d06f53a310cea5811b4c5f"
},
"samtools/idxstats": {
"branch": "master",
"git_sha": "ecece498f10b47b7c9d06f53a310cea5811b4c5f"
},
"samtools/index": {
"branch": "master",
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/sort": {
"branch": "master",
"git_sha": "897c33d5da084b61109500ee44c01da2d3e4e773"
},
"samtools/stats": {
"branch": "master",
"git_sha": "f48a24770e24358e58de66e9b805a70d77cd154b"
},
"subread/featurecounts": {
"branch": "master",
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},
"trimgalore": {
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},
"ucsc/bedgraphtobigwig": {
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},
"untar": {
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"git_sha": "51be617b1ca9bff973655eb899d591ed6ab253b5"
}
}
}
}
}