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Add stage for illustrating adding Rhea IDs to metabolic conversions #16

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DeniseSl22 opened this issue Apr 17, 2021 · 3 comments
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@DeniseSl22
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Add stage for illustrating adding Rhea IDs to metabolic conversions in Advanced Modeling track

@DeniseSl22 DeniseSl22 self-assigned this Apr 17, 2021
@DeniseSl22
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Also check documentation on ChEBI IDs for pH 7.3 : https://www.rhea-db.org/help/chebi-in-rhea#major_microspecies

@DeniseSl22
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Another issue that should be addressed here (in a different step):

What about multi-step reaction, with missing in between reactions, or if several steps are in Rhea as well as a reaction spanning multiple smaller ones?

Current solution:
A->B->C->D ; all individual Rhea IDs, added dotted MIM-conversion from A->D with more general Rhea ID.

@Chris-Evelo
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Sounds like a good solution and one that is extremely useful in the world of elementary path analysis.

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