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updated text and image size
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khanspers committed Aug 31, 2024
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Expand Up @@ -50,17 +50,18 @@ <h2>Challenge</h2>
<ul>
<li>Download the starter pathway here: <a href="https://academy.wikipathways.org/data/draw-compartment-start.gpml">advanced-literature-reference.gpml</a>.</li>
<li>Open the GPML file in any text editor.</li>
<li>We are going to add a reference for a textbook: <a href="https://www.taylorfrancis.com/books/edit/10.1201/9780203503867/metabolism-molecular-physiology-saccharomyces-cerevisiae-michael-schweizer-richard-dickinson" target="_blank">Metabolism and Molecular Physiology of Saccharomyces Cerevisiae
</a>. At a minimum, the reference should include the identifier (DOI 10.1201/9780203503867) and the database (in this case DOI), but we can also enter additional information. In this case, we also have the following information:
<li>We are going to add a reference for a textbook: <a href="https://www.taylorfrancis.com/books/edit/10.1201/9780203503867/metabolism-molecular-physiology-saccharomyces-cerevisiae-michael-schweizer-richard-dickinson" target="_blank">Metabolism and Molecular Physiology of Saccharomyces Cerevisiae</a>. At a minimum, the reference has to include the <b>identifier</b> (DOI 10.1201/9780203503867) and the <b>database</b> (in this case DOI), but we can also enter additional information. In this case, we also have the following information:
<ul>
<li>Title</li>
<li>Authors</li>
<li>Publication year</li>
</ul></li>
<li>The reference needs to be added in the <code>Biopax</code> section of the GPML, which is usually at the end. The format of the reference should be as follows:
<br /><br />

<img src="biopax-lit-ref.png" width="250px">
<img src="biopax-lit-ref.png" width="1000px">
</li>
<br /><br />
<li>When you are done, save your GPML file.</li>
<li>Drag-and-drop the GPML file below to check if it is correct.</li>
</ul>
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