From 8de9635546e0344be8f4ffa2883b0db76e12f46c Mon Sep 17 00:00:00 2001
From: Robert Petryszak <info@datasome.co.uk>
Date: Wed, 21 Feb 2024 10:34:06 +0000
Subject: [PATCH] Corrected method call

---
 notebooks/T1_Method3.ipynb | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/notebooks/T1_Method3.ipynb b/notebooks/T1_Method3.ipynb
index 764e3451..56f2e712 100644
--- a/notebooks/T1_Method3.ipynb
+++ b/notebooks/T1_Method3.ipynb
@@ -234,7 +234,7 @@
    "source": [
     "import anndata\n",
     "\n",
-    "adata = anndata.read_h5ad('/home/jovyan/cpdb_tutorial/data/normalised_log_counts.h5ad')\n",
+    "adata = anndata.read_h5ad(counts_file_path)\n",
     "adata.shape"
    ]
   },