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MAC - mamba error #6

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skanwal opened this issue May 6, 2024 · 2 comments · Fixed by #12
Closed

MAC - mamba error #6

skanwal opened this issue May 6, 2024 · 2 comments · Fixed by #12

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@skanwal
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skanwal commented May 6, 2024

 $ mamba install cwltool graphviz wget git nodejs
Traceback (most recent call last):
  File "/Users/kanwals/miniconda/envs/cwltutorial/bin/mamba", line 7, in <module>
    from mamba.mamba import main
  File "/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/mamba/mamba.py", line 49, in <module>
    import libmambapy as api
  File "/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/libmambapy/__init__.py", line 7, in <module>
    raise e
  File "/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/libmambapy/__init__.py", line 4, in <module>
    from libmambapy.bindings import *  # noqa: F401,F403
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
ImportError: dlopen(/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/libmambapy/bindings.cpython-311-darwin.so, 0x0002): Library not loaded: @rpath/libarchive.13.dylib
  Referenced from: <93863E94-4249-375D-BA9E-AF3A463FD1A0> /Users/kanwals/miniconda/envs/cwltutorial/lib/libmamba.2.0.0.dylib
  Reason: tried: '/Users/kanwals/miniconda/envs/cwltutorial/lib/libarchive.13.dylib' (no such file), '/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/libmambapy/../../../libarchive.13.dylib' (no such file), '/Users/kanwals/miniconda/envs/cwltutorial/lib/python3.11/site-packages/libmambapy/../../../libarchive.13.dylib' (no such file), '/Users/kanwals/miniconda/envs/cwltutorial/bin/../lib/libarchive.13.dylib' (no such file), '/Users/kanwals/miniconda/envs/cwltutorial/bin/../lib/libarchive.13.dylib' (no such file), '/usr/local/lib/libarchive.13.dylib' (no such file), '/usr/lib/libarchive.13.dylib' (no such file, not in dyld cache)

Tried downgrading mamba mamba-org/mamba#1826 but then run into other issues.

@skanwal
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skanwal commented May 6, 2024

Other reported issues on Sonoma conda-forge/miniforge#512

Might need to remove mamba from the instructions.

@alexiswl alexiswl linked a pull request May 6, 2024 that will close this issue
@skanwal
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skanwal commented May 6, 2024

Fixed with #12

@skanwal skanwal closed this as completed May 6, 2024
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