diff --git a/src/main/java/at/ac/tuwien/damap/rest/dmp/service/DmpService.java b/src/main/java/at/ac/tuwien/damap/rest/dmp/service/DmpService.java index 92a9722b..8cfd53da 100644 --- a/src/main/java/at/ac/tuwien/damap/rest/dmp/service/DmpService.java +++ b/src/main/java/at/ac/tuwien/damap/rest/dmp/service/DmpService.java @@ -255,7 +255,13 @@ private void fetchORCIDContributorInfo(Dmp dmp) { var identifier = contributor.getPersonIdentifier(); if (identifier != null && identifier.getIdentifierType().equals(EIdentifierType.ORCID)) { - ContributorDOMapper.mapDOtoEntity(orcidPersonService.read(identifier.getIdentifier()), contributor); + try { + ContributorDOMapper.mapDOtoEntity(orcidPersonService.read(identifier.getIdentifier()), contributor); + } catch (Exception e) { + log.warn(String.format( + "Could not fetch ORCID or map contributor info for identifier '%s'.%nDetail error message: %s", + identifier.getIdentifier(), e)); + } } }); } diff --git a/src/main/java/at/ac/tuwien/damap/rest/persons/orcid/ORCIDMapper.java b/src/main/java/at/ac/tuwien/damap/rest/persons/orcid/ORCIDMapper.java index d30e6910..fa546485 100644 --- a/src/main/java/at/ac/tuwien/damap/rest/persons/orcid/ORCIDMapper.java +++ b/src/main/java/at/ac/tuwien/damap/rest/persons/orcid/ORCIDMapper.java @@ -46,9 +46,14 @@ public ContributorDO mapRecordEntityToPersonDO(ORCIDRecord orcidRecord, contributorDO.setFirstName(orcidRecord.getPerson().getName().getGivenNames().getValue()); contributorDO.setLastName(orcidRecord.getPerson().getName().getFamilyName().getValue()); - var primaryMail = orcidRecord.getPerson().getEmails().getEmail().stream().filter(ORCIDEmail::isPrimary) - .findFirst(); - contributorDO.setMbox(primaryMail.isPresent() ? primaryMail.get().getEmail() : null); + var emails = orcidRecord.getPerson().getEmails().getEmail(); + if (!emails.isEmpty()) { + var primaryMail = emails.stream().filter(ORCIDEmail::isPrimary) + .findFirst(); + + String mail = primaryMail.isPresent() ? primaryMail.get().getEmail() : emails.get(0).getEmail(); + contributorDO.setMbox(mail); + } List affiliations = new ArrayList<>(); diff --git a/src/test/java/at/ac/tuwien/damap/TestSetup.java b/src/test/java/at/ac/tuwien/damap/TestSetup.java new file mode 100644 index 00000000..85f768d7 --- /dev/null +++ b/src/test/java/at/ac/tuwien/damap/TestSetup.java @@ -0,0 +1,48 @@ +package at.ac.tuwien.damap; + +import static org.mockito.ArgumentMatchers.any; + +import javax.inject.Inject; + +import org.junit.jupiter.api.BeforeEach; +import org.mockito.Mockito; + +import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; +import at.ac.tuwien.damap.rest.persons.MockUniversityPersonServiceImpl; +import at.ac.tuwien.damap.rest.persons.orcid.ORCIDMapper; +import at.ac.tuwien.damap.rest.persons.orcid.ORCIDPersonServiceImpl; +import at.ac.tuwien.damap.security.SecurityService; +import at.ac.tuwien.damap.util.TestDOFactory; +import io.quarkus.test.junit.QuarkusTest; +import io.quarkus.test.junit.mockito.InjectMock; + +// Common config for test case setup +@QuarkusTest +public class TestSetup { + @Inject + TestDOFactory testDOFactory; + + @InjectMock + protected SecurityService securityService; + + @InjectMock + MockUniversityPersonServiceImpl personService; + + @InjectMock + protected ORCIDPersonServiceImpl orcidPersonServiceImpl; + + protected DmpDO dmpDO; + + @BeforeEach + public void setup() { + Mockito.when(securityService.getUserId()).thenReturn("012345"); + Mockito.when(securityService.getUserName()).thenReturn("testUser"); + Mockito.when(personService.read(any(String.class))).thenReturn(testDOFactory.getTestContributorDO()); + Mockito.when(orcidPersonServiceImpl.read(any(String.class))).thenReturn(testDOFactory.getTestContributorDO()); + Mockito.when(orcidPersonServiceImpl.read(any(String.class))) + .thenReturn( + ORCIDMapper.mapRecordEntityToPersonDO(testDOFactory.getORCIDTestRecord(), + testDOFactory.getTestContributorDO())); + dmpDO = testDOFactory.getOrCreateTestDmpDO(); + } +} diff --git a/src/test/java/at/ac/tuwien/damap/conversion/AbstractTemplateExportScienceEuropeComponentsTest.java b/src/test/java/at/ac/tuwien/damap/conversion/AbstractTemplateExportScienceEuropeComponentsTest.java index 773771f2..54caebad 100644 --- a/src/test/java/at/ac/tuwien/damap/conversion/AbstractTemplateExportScienceEuropeComponentsTest.java +++ b/src/test/java/at/ac/tuwien/damap/conversion/AbstractTemplateExportScienceEuropeComponentsTest.java @@ -1,6 +1,7 @@ package at.ac.tuwien.damap.conversion; import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; +import at.ac.tuwien.damap.rest.persons.orcid.ORCIDPersonServiceImpl; import at.ac.tuwien.damap.rest.projects.MockProjectServiceImpl; import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.junit.QuarkusTest; @@ -13,6 +14,7 @@ import javax.inject.Inject; +import static org.mockito.ArgumentMatchers.any; import static org.mockito.ArgumentMatchers.anyString; @QuarkusTest @@ -25,13 +27,17 @@ class AbstractTemplateExportScienceEuropeComponentsTest extends AbstractTemplate @InjectMock MockProjectServiceImpl mockProjectService; + @InjectMock + ORCIDPersonServiceImpl orcidPersonServiceImpl; + @BeforeEach public void setup() { Mockito.when(mockProjectService.read(anyString())).thenReturn(testDOFactory.getTestProjectDO()); + Mockito.when(orcidPersonServiceImpl.read(any(String.class))).thenReturn(testDOFactory.getTestContributorDO()); } @Test - void determinteDatasetIDsTest(){ + void determinteDatasetIDsTest() { DmpDO dmpDO = testDOFactory.getOrCreateTestDmpDO(); exportSetup(dmpDO.getId()); Assertions.assertEquals(datasetTableIDs.size(), datasets.size(), dmpDO.getDatasets().size()); diff --git a/src/test/java/at/ac/tuwien/damap/conversion/ExportFWFTemplateTest.java b/src/test/java/at/ac/tuwien/damap/conversion/ExportFWFTemplateTest.java index 974b388d..ad779f29 100644 --- a/src/test/java/at/ac/tuwien/damap/conversion/ExportFWFTemplateTest.java +++ b/src/test/java/at/ac/tuwien/damap/conversion/ExportFWFTemplateTest.java @@ -1,21 +1,21 @@ package at.ac.tuwien.damap.conversion; +import javax.inject.Inject; + +import org.apache.poi.xwpf.usermodel.XWPFDocument; +import org.junit.jupiter.api.Assertions; +import org.junit.jupiter.api.Test; + +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; import at.ac.tuwien.damap.rest.projects.MockProjectServiceImpl; import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.junit.QuarkusTest; import io.quarkus.test.junit.mockito.InjectMock; import io.quarkus.test.security.TestSecurity; -import org.apache.poi.xwpf.usermodel.XWPFDocument; -import org.junit.jupiter.api.Assertions; -import org.junit.jupiter.api.BeforeEach; -import org.junit.jupiter.api.Test; -import org.mockito.Mockito; - -import javax.inject.Inject; @QuarkusTest -class ExportFWFTemplateTest { +class ExportFWFTemplateTest extends TestSetup { @Inject ExportFWFTemplate exportFWFTemplate; @@ -26,13 +26,6 @@ class ExportFWFTemplateTest { @InjectMock MockProjectServiceImpl mockProjectService; - String projectId = "-1"; - - @BeforeEach - public void setup() { - Mockito.when(mockProjectService.read(projectId)).thenReturn(testDOFactory.getTestProjectDO()); - } - @Test @TestSecurity(authorizationEnabled = false) void testFWFTemplateDmp() { @@ -52,7 +45,7 @@ void testFWFTemplateDmp() { void testEmptyFWFTemplateDmp() { final DmpDO emptyDmpDO = testDOFactory.getOrCreateTestDmpDOEmpty(); - //testing the export document return not a null document + // testing the export document return not a null document XWPFDocument document = null; try { document = exportFWFTemplate.exportTemplate(emptyDmpDO.getId()); diff --git a/src/test/java/at/ac/tuwien/damap/conversion/ExportHorizonEuropeTemplateTest.java b/src/test/java/at/ac/tuwien/damap/conversion/ExportHorizonEuropeTemplateTest.java index fb1e5915..3adb0e70 100644 --- a/src/test/java/at/ac/tuwien/damap/conversion/ExportHorizonEuropeTemplateTest.java +++ b/src/test/java/at/ac/tuwien/damap/conversion/ExportHorizonEuropeTemplateTest.java @@ -1,5 +1,6 @@ package at.ac.tuwien.damap.conversion; +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; import at.ac.tuwien.damap.rest.projects.MockProjectServiceImpl; import at.ac.tuwien.damap.util.TestDOFactory; @@ -8,14 +9,12 @@ import io.quarkus.test.security.TestSecurity; import org.apache.poi.xwpf.usermodel.XWPFDocument; import org.junit.jupiter.api.Assertions; -import org.junit.jupiter.api.BeforeEach; import org.junit.jupiter.api.Test; -import org.mockito.Mockito; import javax.inject.Inject; @QuarkusTest -class ExportHorizonEuropeTemplateTest { +class ExportHorizonEuropeTemplateTest extends TestSetup { @Inject ExportHorizonEuropeTemplate exportHorizonEuropeTemplate; @@ -26,13 +25,6 @@ class ExportHorizonEuropeTemplateTest { @InjectMock MockProjectServiceImpl mockProjectService; - String projectId = "-1"; - - @BeforeEach - public void setup() { - Mockito.when(mockProjectService.read(projectId)).thenReturn(testDOFactory.getTestProjectDO()); - } - @Test @TestSecurity(authorizationEnabled = false) void testTemplateDmp() { @@ -52,7 +44,7 @@ void testTemplateDmp() { void testEmptyTemplateDmp() { final DmpDO emptyDmpDO = testDOFactory.getOrCreateTestDmpDOEmpty(); - //testing the export document return not a null document + // testing the export document return not a null document XWPFDocument document = null; try { document = exportHorizonEuropeTemplate.exportTemplate(emptyDmpDO.getId()); diff --git a/src/test/java/at/ac/tuwien/damap/rest/AccessResourceTest.java b/src/test/java/at/ac/tuwien/damap/rest/AccessResourceTest.java index 06bb0c43..318a0c46 100644 --- a/src/test/java/at/ac/tuwien/damap/rest/AccessResourceTest.java +++ b/src/test/java/at/ac/tuwien/damap/rest/AccessResourceTest.java @@ -1,19 +1,13 @@ package at.ac.tuwien.damap.rest; +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.enums.EFunctionRole; import at.ac.tuwien.damap.rest.access.domain.AccessDO; import at.ac.tuwien.damap.rest.access.service.AccessService; import at.ac.tuwien.damap.rest.dmp.domain.ContributorDO; -import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; -import at.ac.tuwien.damap.rest.persons.MockUniversityPersonServiceImpl; -import at.ac.tuwien.damap.rest.persons.PersonService; -import at.ac.tuwien.damap.security.SecurityService; -import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.common.http.TestHTTPEndpoint; import io.quarkus.test.junit.QuarkusTest; -import io.quarkus.test.junit.mockito.InjectMock; import io.quarkus.test.security.TestSecurity; -import org.junit.jupiter.api.BeforeEach; import org.junit.jupiter.api.Test; import org.mockito.Mockito; @@ -22,34 +16,13 @@ import static io.restassured.RestAssured.given; import static org.hamcrest.Matchers.greaterThanOrEqualTo; -import static org.mockito.ArgumentMatchers.any; @QuarkusTest @TestHTTPEndpoint(AccessResource.class) -class AccessResourceTest { - - @Inject - TestDOFactory testDOFactory; +class AccessResourceTest extends TestSetup { @Inject AccessService accessService; - @InjectMock - SecurityService securityService; - - @InjectMock - MockUniversityPersonServiceImpl personService; - - - DmpDO dmpDO; - - @BeforeEach - public void setup() { - Mockito.when(securityService.getUserId()).thenReturn("012345"); - Mockito.when(securityService.getUserName()).thenReturn("testUser"); - Mockito.when(personService.read(any(String.class))).thenReturn(testDOFactory.getTestContributorDO()); - dmpDO = testDOFactory.getOrCreateTestDmpDO(); - } - @Test @TestSecurity(user = "userJwt", roles = "user") void testGetAccessList_Valid() { diff --git a/src/test/java/at/ac/tuwien/damap/rest/DataManagementPlanResourceTest.java b/src/test/java/at/ac/tuwien/damap/rest/DataManagementPlanResourceTest.java index 9842884e..2dd56b4a 100644 --- a/src/test/java/at/ac/tuwien/damap/rest/DataManagementPlanResourceTest.java +++ b/src/test/java/at/ac/tuwien/damap/rest/DataManagementPlanResourceTest.java @@ -1,27 +1,25 @@ package at.ac.tuwien.damap.rest; +import static io.restassured.RestAssured.given; +import static org.hamcrest.Matchers.is; + +import javax.inject.Inject; +import javax.ws.rs.core.MediaType; + +import org.junit.jupiter.api.Test; +import org.mockito.Mockito; + +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; import at.ac.tuwien.damap.rest.version.VersionService; -import at.ac.tuwien.damap.security.SecurityService; import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.common.http.TestHTTPEndpoint; import io.quarkus.test.junit.QuarkusTest; -import io.quarkus.test.junit.mockito.InjectMock; import io.quarkus.test.security.TestSecurity; -import org.junit.jupiter.api.BeforeEach; -import org.junit.jupiter.api.Disabled; -import org.junit.jupiter.api.Test; -import org.mockito.Mockito; - -import javax.inject.Inject; -import javax.ws.rs.core.MediaType; - -import static io.restassured.RestAssured.given; -import static org.hamcrest.Matchers.is; @QuarkusTest @TestHTTPEndpoint(DataManagementPlanResource.class) -class DataManagementPlanResourceTest { +class DataManagementPlanResourceTest extends TestSetup { @Inject TestDOFactory testDOFactory; @@ -29,15 +27,6 @@ class DataManagementPlanResourceTest { @Inject VersionService versionService; - @InjectMock - SecurityService securityService; - - @BeforeEach - public void setup() { - Mockito.when(securityService.getUserId()).thenReturn("012345"); - Mockito.when(securityService.getUserName()).thenReturn("testUser"); - } - @Test void testGetAllPlansEndpoint_Invalid() { given() @@ -216,7 +205,9 @@ void testGetDmpByIdAndRevisionlanEndpoint_Valid() { testDOFactory.getOrCreateTestVersionDO(); given() .contentType(MediaType.APPLICATION_JSON) - .when().get("/" + dmpDO.getId() + "/" + versionService.getDmpVersions(dmpDO.getId()).get(0).getRevisionNumber()) + .when() + .get("/" + dmpDO.getId() + "/" + + versionService.getDmpVersions(dmpDO.getId()).get(0).getRevisionNumber()) .then() .statusCode(200); } diff --git a/src/test/java/at/ac/tuwien/damap/rest/dmp/DmpServiceTest.java b/src/test/java/at/ac/tuwien/damap/rest/dmp/DmpServiceTest.java index e04d1272..2d8eaab2 100644 --- a/src/test/java/at/ac/tuwien/damap/rest/dmp/DmpServiceTest.java +++ b/src/test/java/at/ac/tuwien/damap/rest/dmp/DmpServiceTest.java @@ -1,29 +1,42 @@ package at.ac.tuwien.damap.rest.dmp; +import java.util.ArrayList; +import java.util.Arrays; +import java.util.List; +import java.util.Optional; + +import javax.inject.Inject; + +import org.junit.jupiter.api.Assertions; +import org.junit.jupiter.api.Test; + +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.enums.EContributorRole; +import at.ac.tuwien.damap.enums.EIdentifierType; import at.ac.tuwien.damap.rest.dmp.domain.ContributorDO; import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; +import at.ac.tuwien.damap.rest.dmp.domain.IdentifierDO; import at.ac.tuwien.damap.rest.dmp.domain.ProjectDO; import at.ac.tuwien.damap.rest.dmp.domain.RepositoryDO; +import at.ac.tuwien.damap.rest.persons.orcid.ORCIDPersonServiceImpl; +import at.ac.tuwien.damap.rest.persons.orcid.models.ORCIDRecord; import at.ac.tuwien.damap.util.MockDmpService; import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.junit.QuarkusTest; - -import java.util.ArrayList; -import java.util.Arrays; -import java.util.List; -import java.util.Optional; -import javax.inject.Inject; -import org.junit.jupiter.api.Assertions; -import org.junit.jupiter.api.Test; +import io.quarkus.test.junit.mockito.InjectMock; +import lombok.extern.java.Log; @QuarkusTest -class DmpServiceTest { - @Inject TestDOFactory testDOFactory; +@Log +class DmpServiceTest extends TestSetup { + @Inject + TestDOFactory testDOFactory; @Inject MockDmpService dmpService; + @InjectMock + ORCIDPersonServiceImpl orcidPersonServiceImpl; @Test void updateProjectLeadTest() { @@ -45,11 +58,10 @@ void updateProjectLeadTest() { // On a new project, the project lead from the CRIS system should be // added as contributor, contact and get the PROJECT_LEADER role. Assertions.assertFalse(dmpDO.getContributors().isEmpty()); - Optional projectLead = - dmpDO.getContributors() + Optional projectLead = dmpDO.getContributors() .stream() .filter( - c -> c.getRole().equals(EContributorRole.PROJECT_LEADER)) + c -> c.getRole().equals(EContributorRole.PROJECT_LEADER)) .findFirst(); Assertions.assertTrue(projectLead.isPresent()); Assertions.assertTrue(projectLead.get().isContact()); @@ -66,34 +78,36 @@ void updateProjectLeadTest() { // Add other contributor and set as contact. ContributorDO otherContributor = new ContributorDO() { - { setContact(true); } + { + setContact(true); + } }; dmpDO.setContributors( - Arrays.asList(projectLead.get(), otherContributor)); + Arrays.asList(projectLead.get(), otherContributor)); // Set project again and update. dmpDO.setProject(projectDO); dmpDO = dmpService.update(dmpDO); // Now there should - // - two contributors - // - no project leader (don't override already set role) - // - other contributor is contact (don't override already set contact) + // - two contributors + // - no project leader (don't override already set role) + // - other contributor is contact (don't override already set contact) Assertions.assertEquals(2, dmpDO.getContributors().size()); projectLead = dmpDO.getContributors() - .stream() - .filter(c -> c.getId().equals(projectLeadID)) - .findFirst(); + .stream() + .filter(c -> c.getId().equals(projectLeadID)) + .findFirst(); otherContributor = dmpDO.getContributors() - .stream() - .filter(c -> !c.getId().equals(projectLeadID)) - .findFirst() - .get(); + .stream() + .filter(c -> !c.getId().equals(projectLeadID)) + .findFirst() + .get(); Assertions.assertTrue(projectLead.isPresent()); Assertions.assertFalse(projectLead.get().isContact()); Assertions.assertTrue(otherContributor.isContact()); Assertions.assertEquals( - EContributorRole.PROJECT_MANAGER, projectLead.get().getRole()); + EContributorRole.PROJECT_MANAGER, projectLead.get().getRole()); // Remove project from dmp and update. Nothing should happen. dmpDO.setProject(null); @@ -108,17 +122,41 @@ void updateProjectLeadTest() { dmpDO = dmpService.update(dmpDO); // Now there should be - // - one contributor - // - a project leader - // - a contact (project leader) + // - one contributor + // - a project leader + // - a contact (project leader) Assertions.assertEquals(1, dmpDO.getContributors().size()); projectLead = dmpDO.getContributors() - .stream() - .filter(c -> c.getId().equals(projectLeadID)) - .findFirst(); + .stream() + .filter(c -> c.getId().equals(projectLeadID)) + .findFirst(); Assertions.assertTrue(projectLead.get().isContact()); Assertions.assertEquals( - EContributorRole.PROJECT_LEADER, projectLead.get().getRole()); + EContributorRole.PROJECT_LEADER, projectLead.get().getRole()); + } + + @Test + void fetchORCIDContributorInfo() { + ORCIDRecord testRecord = testDOFactory.getORCIDTestRecord(); + + DmpDO dmpDO = new DmpDO(); + dmpDO.setTitle("fetchORCIDContributorInfo"); + ContributorDO orcidContributorDO = new ContributorDO(); + + IdentifierDO orcidIdentifier = new IdentifierDO(); + orcidIdentifier.setType(EIdentifierType.ORCID); + orcidIdentifier.setIdentifier("orcid"); + + orcidContributorDO.setPersonId(orcidIdentifier); + + dmpDO.setContributors(List.of(orcidContributorDO)); + + dmpDO = dmpService.create(dmpDO, ""); + var contributorDOs = dmpDO.getContributors(); + Assertions.assertFalse(contributorDOs.isEmpty()); + Assertions.assertEquals(testRecord.getPerson().getName().getPath(), + contributorDOs.get(0).getPersonId().getIdentifier()); + } @Test diff --git a/src/test/java/at/ac/tuwien/damap/service/GdprServiceTest.java b/src/test/java/at/ac/tuwien/damap/service/GdprServiceTest.java index 81f9e6e2..7650dca3 100644 --- a/src/test/java/at/ac/tuwien/damap/service/GdprServiceTest.java +++ b/src/test/java/at/ac/tuwien/damap/service/GdprServiceTest.java @@ -1,5 +1,19 @@ package at.ac.tuwien.damap.service; +import static org.hamcrest.MatcherAssert.assertThat; +import static org.hamcrest.Matchers.greaterThanOrEqualTo; +import static org.junit.jupiter.api.Assertions.assertEquals; +import static org.junit.jupiter.api.Assertions.assertTrue; + +import java.util.Arrays; +import java.util.List; +import java.util.Optional; + +import javax.inject.Inject; + +import org.junit.jupiter.api.Test; + +import at.ac.tuwien.damap.TestSetup; import at.ac.tuwien.damap.domain.Contributor; import at.ac.tuwien.damap.enums.EFunctionRole; import at.ac.tuwien.damap.rest.gdpr.domain.GdprQuery; @@ -8,21 +22,9 @@ import at.ac.tuwien.damap.rest.gdpr.service.GdprService; import at.ac.tuwien.damap.util.TestDOFactory; import io.quarkus.test.junit.QuarkusTest; -import org.junit.jupiter.api.BeforeEach; -import org.junit.jupiter.api.Test; - -import javax.inject.Inject; -import java.util.Arrays; -import java.util.List; -import java.util.Optional; - -import static org.hamcrest.MatcherAssert.assertThat; -import static org.hamcrest.Matchers.greaterThanOrEqualTo; -import static org.junit.jupiter.api.Assertions.assertEquals; -import static org.junit.jupiter.api.Assertions.assertTrue; @QuarkusTest -class GdprServiceTest { +class GdprServiceTest extends TestSetup { @Inject GdprService gdprService; @@ -30,11 +32,6 @@ class GdprServiceTest { @Inject TestDOFactory testDOFactory; - @BeforeEach - public void setup() { - testDOFactory.getOrCreateTestDmpDO(); - } - @Test void testGdprExtendedData_shouldReturnData() { List result = gdprService.getGdprExtendedData("012345"); diff --git a/src/test/java/at/ac/tuwien/damap/util/TestDOFactory.java b/src/test/java/at/ac/tuwien/damap/util/TestDOFactory.java index 2afda519..568781cd 100644 --- a/src/test/java/at/ac/tuwien/damap/util/TestDOFactory.java +++ b/src/test/java/at/ac/tuwien/damap/util/TestDOFactory.java @@ -1,28 +1,57 @@ package at.ac.tuwien.damap.util; +import java.io.InputStream; +import java.net.URL; +import java.util.Arrays; +import java.util.Date; +import java.util.List; +import java.util.Optional; + +import javax.enterprise.context.ApplicationScoped; +import javax.inject.Inject; +import javax.transaction.Transactional; + +import com.fasterxml.jackson.databind.ObjectMapper; +import com.google.common.io.Resources; + import at.ac.tuwien.damap.domain.Dmp; import at.ac.tuwien.damap.domain.DmpVersion; import at.ac.tuwien.damap.domain.InternalStorage; import at.ac.tuwien.damap.domain.InternalStorageTranslation; -import at.ac.tuwien.damap.enums.*; +import at.ac.tuwien.damap.enums.EAccessRight; +import at.ac.tuwien.damap.enums.EAgreement; +import at.ac.tuwien.damap.enums.EComplianceType; +import at.ac.tuwien.damap.enums.EContributorRole; +import at.ac.tuwien.damap.enums.ECostType; +import at.ac.tuwien.damap.enums.EDataAccessType; +import at.ac.tuwien.damap.enums.EDataKind; +import at.ac.tuwien.damap.enums.EDataQualityType; +import at.ac.tuwien.damap.enums.EDataSource; +import at.ac.tuwien.damap.enums.EDataType; +import at.ac.tuwien.damap.enums.EFundingState; +import at.ac.tuwien.damap.enums.EIdentifierType; +import at.ac.tuwien.damap.enums.ELicense; +import at.ac.tuwien.damap.enums.ESecurityMeasure; import at.ac.tuwien.damap.repo.DmpRepo; import at.ac.tuwien.damap.repo.DmpVersionRepo; import at.ac.tuwien.damap.repo.InternalStorageTranslationRepo; -import at.ac.tuwien.damap.rest.dmp.domain.*; +import at.ac.tuwien.damap.rest.dmp.domain.ContributorDO; +import at.ac.tuwien.damap.rest.dmp.domain.CostDO; +import at.ac.tuwien.damap.rest.dmp.domain.DatasetDO; +import at.ac.tuwien.damap.rest.dmp.domain.DmpDO; +import at.ac.tuwien.damap.rest.dmp.domain.ExternalStorageDO; +import at.ac.tuwien.damap.rest.dmp.domain.FundingDO; +import at.ac.tuwien.damap.rest.dmp.domain.IdentifierDO; +import at.ac.tuwien.damap.rest.dmp.domain.ProjectDO; +import at.ac.tuwien.damap.rest.dmp.domain.RepositoryDO; +import at.ac.tuwien.damap.rest.dmp.domain.StorageDO; import at.ac.tuwien.damap.rest.dmp.mapper.DmpDOMapper; +import at.ac.tuwien.damap.rest.persons.orcid.models.ORCIDRecord; import at.ac.tuwien.damap.rest.version.VersionDO; import at.ac.tuwien.damap.rest.version.VersionDOMapper; import at.ac.tuwien.damap.rest.version.VersionService; import lombok.extern.jbosslog.JBossLog; -import javax.enterprise.context.ApplicationScoped; -import javax.inject.Inject; -import javax.transaction.Transactional; -import java.util.Arrays; -import java.util.Date; -import java.util.List; -import java.util.Optional; - @JBossLog @ApplicationScoped public class TestDOFactory { @@ -154,14 +183,14 @@ private FundingDO getTestFundingDO() { return funding; } - private IdentifierDO getTestIdentifierDO(EIdentifierType type){ + private IdentifierDO getTestIdentifierDO(EIdentifierType type) { IdentifierDO identifier = new IdentifierDO(); identifier.setIdentifier("Unique Identifier 123456"); identifier.setType(type); return identifier; } - public ContributorDO getTestContributorDO(){ + public ContributorDO getTestContributorDO() { ContributorDO contributor = new ContributorDO(); contributor.setUniversityId("Internal Identifier 123456"); contributor.setPersonId(getTestIdentifierDO(EIdentifierType.ORCID)); @@ -174,7 +203,7 @@ public ContributorDO getTestContributorDO(){ return contributor; } - private List getTestContributorList(){ + private List getTestContributorList() { ContributorDO contributor = getTestContributorDO(); contributor.setRole(EContributorRole.DATA_MANAGER); @@ -187,7 +216,7 @@ private List getTestContributorList(){ return Arrays.asList(contributor, secondContributor); } - private List getTestDatasetList(){ + private List getTestDatasetList() { DatasetDO dataset = new DatasetDO(); dataset.setTitle("Dataset Title"); dataset.setSource(EDataSource.NEW); @@ -225,7 +254,7 @@ private List getTestDatasetList(){ return List.of(dataset, dataset2); } - private List getTestRepositoryList(){ + private List getTestRepositoryList() { RepositoryDO repository = new RepositoryDO(); repository.setRepositoryId("r3d100013557"); repository.setTitle("TU Data"); @@ -233,19 +262,21 @@ private List getTestRepositoryList(){ return List.of(repository); } - private List getTestStorageList(){ + private List getTestStorageList() { StorageDO storage = new StorageDO(); - Optional testInternalStorage = internalStorageTranslationRepo.getAllInternalStorageByLanguage("eng").stream() + Optional testInternalStorage = internalStorageTranslationRepo + .getAllInternalStorageByLanguage("eng").stream() .filter(a -> a.getTitle().equals("Test Storage Title")) .findAny(); - testInternalStorage.ifPresent(storageTranslation -> storage.setInternalStorageId(storageTranslation.getInternalStorageId().id)); + testInternalStorage.ifPresent( + storageTranslation -> storage.setInternalStorageId(storageTranslation.getInternalStorageId().id)); storage.setTitle("Internal Host"); storage.setDatasets(List.of("referenceHash123456")); return List.of(storage); } - private List getTestExternalStorageList(){ + private List getTestExternalStorageList() { ExternalStorageDO storage = new ExternalStorageDO(); storage.setTitle("External Host"); storage.setDatasets(List.of("referenceHash123456")); @@ -256,7 +287,7 @@ private List getTestExternalStorageList(){ return List.of(storage); } - private List getTestCostList(){ + private List getTestCostList() { CostDO cost = new CostDO(); cost.setTitle("Cost Item Title"); cost.setValue(50000f); @@ -267,7 +298,6 @@ private List getTestCostList(){ return List.of(cost); } - public DmpDO getOrCreateTestDmpDOEmpty() { final Optional testDmp = dmpRepo.getAll().stream() .filter(a -> a.getTitle().equals("EmptyTestDmp")) @@ -283,7 +313,7 @@ public DmpDO getOrCreateTestDmpDOEmpty() { } @Transactional - public void prepareInternalStorageOption(){ + public void prepareInternalStorageOption() { if (internalStorageTranslationRepo.listAll().size() > 0) return; @@ -302,7 +332,6 @@ public void prepareInternalStorageOption(){ internalStorageTranslation.persistAndFlush(); } - @Transactional public DmpDO getOrCreateTestDmpDOInvalidData() { DmpDO newInvalidTestDmpDO = getOrCreateTestDmpDO(); @@ -316,7 +345,7 @@ public DmpDO getOrCreateTestDmpDOInvalidData() { return newInvalidTestDmpDO; } - public VersionDO getOrCreateTestVersionDO(){ + public VersionDO getOrCreateTestVersionDO() { DmpDO dmpDO = getOrCreateTestDmpDO(); final Optional testDmpVersion = dmpVersionRepo.getAll().stream() @@ -334,4 +363,18 @@ public VersionDO getOrCreateTestVersionDO(){ return getOrCreateTestVersionDO(); } + + public ORCIDRecord getORCIDTestRecord() { + ORCIDRecord record = new ORCIDRecord(); + URL url = Resources.getResource("json/orcidRecord.json"); + try (InputStream in = url.openStream()) { + ObjectMapper mapper = new ObjectMapper(); + record = mapper.readValue(in, ORCIDRecord.class); + + } catch (Exception e) { + e.printStackTrace(); + } + + return record; + } } diff --git a/src/test/resources/json/orcidRecord.json b/src/test/resources/json/orcidRecord.json new file mode 100644 index 00000000..41ad2876 --- /dev/null +++ b/src/test/resources/json/orcidRecord.json @@ -0,0 +1,7439 @@ +{ + "orcid-identifier": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "preferences": { "locale": "en" }, + "history": { + "creation-method": "WEBSITE", + "completion-date": null, + "submission-date": { "value": 1382480727751 }, + "last-modified-date": { "value": 1702302246150 }, + "claimed": true, + "source": null, + "deactivation-date": null, + "verified-email": true, + "verified-primary-email": true + }, + "person": { + "last-modified-date": { "value": 1688929333985 }, + "name": { + "created-date": { "value": 1460753774818 }, + "last-modified-date": { "value": 1460753774818 }, + "given-names": { "value": "GivenName" }, + "family-name": { "value": "FamilyName" }, + "credit-name": { "value": "GivenName FamilyName" }, + "source": null, + "visibility": "public", + "path": "0000-0001-5863-4514" + }, + "other-names": { + "last-modified-date": null, + "other-name": [], + "path": "/0000-0001-5863-4514/other-names" + }, + "biography": { + "created-date": { "value": 1460753774822 }, + "last-modified-date": { "value": 1688927553441 }, + "content": "Example biography content", + "visibility": "public", + "path": "/0000-0001-5863-4514/biography" + }, + "emails": { + "last-modified-date": null, + "email": [], + "path": "/0000-0001-5863-4514/email" + }, + "addresses": { + "last-modified-date": { "value": 1688929291031 }, + "address": [ + { + "created-date": { "value": 1667211711030 }, + "last-modified-date": { "value": 1688929291031 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "country": { "value": "ES" }, + "visibility": "public", + "path": "/0000-0001-5863-4514/address/2729833", + "put-code": 2729833, + "display-index": 4 + }, + { + "created-date": { "value": 1453659001325 }, + "last-modified-date": { "value": 1688929291027 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "country": { "value": "AT" }, + "visibility": "public", + "path": "/0000-0001-5863-4514/address/81358", + "put-code": 81358, + "display-index": 3 + }, + { + "created-date": { "value": 1667211711036 }, + "last-modified-date": { "value": 1667211711036 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "country": { "value": "SE" }, + "visibility": "public", + "path": "/0000-0001-5863-4514/address/2729834", + "put-code": 2729834, + "display-index": 2 + }, + { + "created-date": { "value": 1667211711041 }, + "last-modified-date": { "value": 1688929291019 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "country": { "value": "CA" }, + "visibility": "public", + "path": "/0000-0001-5863-4514/address/2729835", + "put-code": 2729835, + "display-index": 1 + } + ], + "path": "/0000-0001-5863-4514/address" + }, + "keywords": { + "last-modified-date": { "value": 1688929281045 }, + "keyword": [ + { + "created-date": { "value": 1667211675608 }, + "last-modified-date": { "value": 1688929281045 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "content": "synthetic microbiology", + "visibility": "public", + "path": "/0000-0001-5863-4514/keywords/2797875", + "put-code": 2797875, + "display-index": 5 + }, + { + "created-date": { "value": 1382484814586 }, + "last-modified-date": { "value": 1688929281045 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "content": "structural biochemistry", + "visibility": "public", + "path": "/0000-0001-5863-4514/keywords/35677", + "put-code": 35677, + "display-index": 4 + }, + { + "created-date": { "value": 1549817260056 }, + "last-modified-date": { "value": 1667211675613 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "content": "molecular biology, protein biochemistry", + "visibility": "public", + "path": "/0000-0001-5863-4514/keywords/1188781", + "put-code": 1188781, + "display-index": 3 + }, + { + "created-date": { "value": 1549817260053 }, + "last-modified-date": { "value": 1688929281045 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "content": "proteomics, degradomics", + "visibility": "public", + "path": "/0000-0001-5863-4514/keywords/1188780", + "put-code": 1188780, + "display-index": 2 + }, + { + "created-date": { "value": 1549817260057 }, + "last-modified-date": { "value": 1688929281045 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "content": "protease profiling, proteolytic processing", + "visibility": "public", + "path": "/0000-0001-5863-4514/keywords/1188782", + "put-code": 1188782, + "display-index": 1 + } + ], + "path": "/0000-0001-5863-4514/keywords" + }, + "external-identifiers": { + "last-modified-date": { "value": 1549382509946 }, + "external-identifier": [ + { + "created-date": { "value": 1383100965980 }, + "last-modified-date": { "value": 1549382509941 }, + "source": { + "source-orcid": null, + "source-client-id": { + "uri": "https://orcid.org/client/0000-0002-5982-8983", + "path": "0000-0002-5982-8983", + "host": "orcid.org" + }, + "source-name": { "value": "Scopus - Elsevier" }, + "assertion-origin-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "assertion-origin-client-id": null, + "assertion-origin-name": { "value": "GivenName FamilyName" } + }, + "external-id-type": "Scopus Author ID", + "external-id-value": "8706725900", + "external-id-url": { + "value": "http://www.scopus.com/inward/authorDetails.url?authorID=8706725900&partnerID=MN8TOARS" + }, + "external-id-relationship": "self", + "visibility": "public", + "path": "/0000-0001-5863-4514/external-identifiers/167632", + "put-code": 167632, + "display-index": 2 + }, + { + "created-date": { "value": 1470381692366 }, + "last-modified-date": { "value": 1549382509946 }, + "source": { + "source-orcid": null, + "source-client-id": { + "uri": "https://orcid.org/client/0000-0003-1377-5676", + "path": "0000-0003-1377-5676", + "host": "orcid.org" + }, + "source-name": { "value": "ResearcherID" }, + "assertion-origin-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "assertion-origin-client-id": null, + "assertion-origin-name": { "value": "GivenName FamilyName" } + }, + "external-id-type": "ResearcherID", + "external-id-value": "L-3733-2016", + "external-id-url": { + "value": "http://www.researcherid.com/rid/L-3733-2016" + }, + "external-id-relationship": "self", + "visibility": "public", + "path": "/0000-0001-5863-4514/external-identifiers/524194", + "put-code": 524194, + "display-index": 1 + } + ], + "path": "/0000-0001-5863-4514/external-identifiers" + }, + "path": "/0000-0001-5863-4514/person" + }, + "activities-summary": { + "last-modified-date": { "value": 1701918838634 }, + "educations": { + "last-modified-date": { "value": 1571170420263 }, + "affiliation-group": [ + { + "last-modified-date": { "value": 1571170420263 }, + "external-ids": { "external-id": [] }, + "summaries": [ + { + "education-summary": { + "created-date": { "value": 1517335502208 }, + "last-modified-date": { "value": 1571170420263 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "put-code": 5299491, + "department-name": null, + "role-title": "Doctor of Natural Sciences (Dr. rer. nat.)", + "start-date": { + "year": { "value": "2007" }, + "month": null, + "day": null + }, + "end-date": { + "year": { "value": "2011" }, + "month": null, + "day": null + }, + "organization": { + "name": "University of Salzburg", + "address": { + "city": "Salzburg", + "region": null, + "country": "AT" + }, + "disambiguated-organization": { + "disambiguated-organization-identifier": "grid.7039.d", + "disambiguation-source": "GRID" + } + }, + "url": { + "value": "https://ubsearch.sbg.ac.at:443/USB:USB_local_data:USB_alma21133710670003341" + }, + "external-ids": null, + "display-index": "1", + "visibility": "public", + "path": "/0000-0001-5863-4514/education/5299491" + } + } + ] + } + ], + "path": "/0000-0001-5863-4514/educations" + }, + "employments": { + "last-modified-date": { "value": 1688928307901 }, + "affiliation-group": [ + { + "last-modified-date": { "value": 1688927770709 }, + "external-ids": { "external-id": [] }, + "summaries": [ + { + "employment-summary": { + "created-date": { "value": 1658233995853 }, + "last-modified-date": { "value": 1688927770709 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "put-code": 18092725, + "department-name": "Department of Structural and Molecular Biology", + "role-title": "Ramon y Cajal Research Investigator, Group Leader", + "start-date": { + "year": { "value": "2022" }, + "month": { "value": "09" }, + "day": { "value": "01" } + }, + "end-date": null, + "organization": { + "name": "IBMB-CSIC: Barcelona, Barcelona, ES", + "address": { + "city": "Barcelona", + "region": "Catalunya", + "country": "ES" + }, + "disambiguated-organization": null + }, + "url": { + "value": "https://www.ibmb.csic.es/en/department-of-structural-and-molecular-biology/synthetic-structural-biology/" + }, + "external-ids": null, + "display-index": "1", + "visibility": "public", + "path": "/0000-0001-5863-4514/employment/18092725" + } + } + ] + }, + { + "last-modified-date": { "value": 1688928146064 }, + "external-ids": { "external-id": [] }, + "summaries": [ + { + "employment-summary": { + "created-date": { "value": 1578925310954 }, + "last-modified-date": { "value": 1688928146064 }, + "source": { + "source-orcid": { + "uri": "https://orcid.org/0000-0001-5863-4514", + "path": "0000-0001-5863-4514", + "host": "orcid.org" + }, + "source-client-id": null, + "source-name": { "value": "GivenName FamilyName" }, + "assertion-origin-orcid": null, + "assertion-origin-client-id": null, + "assertion-origin-name": null + }, + "put-code": 9539498, + "department-name": "Department of Structural Biology, Proteolysis Lab", + "role-title": "Research Associate funded by the Beatriu de Pinós MSCA COFUND Program", + "start-date": { + "year": { "value": "2019" }, + "month": { "value": "10" }, + "day": { "value": "01" } + }, + "end-date": { + "year": { "value": "2022" }, + "month": { "value": "08" }, + "day": { "value": "31" } + }, + "organization": { + "name": "IBMB-CSIC", + "address": { + "city": "Barcelona", + "region": "Barcelona", + "country": "ES" + }, + "disambiguated-organization": null + }, + "url": { + "value": "https://agaur.gencat.cat/web/.content/Documents/WEB-BP/Resolucio-atorgats-BP2018-angles.pdf" + }, + "external-ids": null, + "display-index": "1", + "visibility": "public", + "path": "/0000-0001-5863-4514/employment/9539498" + } + } + ] + }, + { + "last-modified-date": { "value": 1641473209474 }, + "external-ids": { "external-id": [] }, + "summaries": [ + { + "employment-summary": { + "created-date": { "value": 1517335093547 }, + "last-modified-date": { "value": 1641473209474 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