DESCRIPTION

Package: OptiLCMS
Title: Optimized LC-MS Spectra Processing
Version: 0.99.3
Authors@R: c(
           person(given = "Zhiqiang",
           family = "Pang",
           role = c("aut", "cre"),
           email = "zhiqiang.pang@mail.mcgill.ca",
           comment = c(ORCID = "0000-0003-1654-7556")),
           person(given = "Jasmine",
           family = "Chong",
           role = c("aut"),
           email = "jasmine.chong@mail.mcgill.ca",
           comment = c(ORCID = "0000-0002-2848-038X")),
           person(given = "Jianguo",
           family = "Xia",
           role = c("aut"),
           email = "jeff.xia@mcgill.ca",
           comment = c(ORCID = "0000-0003-2040-2624"))
           )
Maintainer: Zhiqiang Pang <zhiqiang.pang@mail.mcgill.ca>
Description: A pipeline for users to do the LC-MS (Liquid chromatography–mass spectrometry) raw data processing with automatically optimized parameters.
License: MIT + file LICENSE
Depends: R (>= 4.0.0), methods, Biobase, BiocParallel (>= 1.8.0), stats, utils
Imports: mzR (>= 2.22.0), lattice, RColorBrewer, plyr,
         RBGL, S4Vectors, ggplot2, graph, progress, rsm, Cairo, Hmisc, entropy, cluster, data.table,
         scales, ggrepel, MSnbase
Suggests: knitr (>= 1.1.0), ncdf4, MALDIquant, SummarizedExperiment, MassSpecWavelet, mtbls2
Enhances: XML, parallel
BugReports: https://github.com/xia-lab/OptiLCMS/issues/new
URL: https://github.com/xia-lab/OptiLCMS
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1